STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CopRPutative response regulator ArlR; KEGG: cnc:CNE_2c16400 4.2e-43 czcS; sensor protein CzcS K07665; Psort location: Cytoplasmic, score: 9.67. (221 aa)    
Predicted Functional Partners:
KXB63214.1
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein; KEGG: fnu:FN0586 2.4e-86 two-component sensor kinase czcS K00936; Psort location: CytoplasmicMembrane, score: 9.51.
 
 0.978
SaeS
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein; KEGG: sgo:SGO_1180 6.3e-104 histidine kinase; K10681 two-component system, OmpR family, sensor histidine kinase SaeS; Psort location: CytoplasmicMembrane, score: 9.96.
 
 0.898
KXB59073.1
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein; KEGG: cst:CLOST_1601 2.1e-55 sensor protein; Psort location: CytoplasmicMembrane, score: 9.81.
 
 0.887
KXB60543.1
KEGG: suh:SAMSHR1132_00200 3.9e-134 sensor kinase protein; K07652 two-component system, OmpR family, sensor histidine kinase VicK; Psort location: CytoplasmicMembrane, score: 9.96.
 
 0.829
GraS
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein; KEGG: aoe:Clos_2083 5.3e-75 integral membrane sensor signal transduction histidine kinase; K00936; Psort location: CytoplasmicMembrane, score: 8.78.
 
 0.749
KXB63215.1
Peptidase propeptide and YPEB domain protein; KEGG: ddi:DDB_G0279261 2.8e-08 hypothetical protein; K06968 23S rRNA (cytidine2498-2'-O)-methyltransferase.
       0.415
LsrC
Branched-chain amino acid ABC transporter, permease protein; KEGG: rlt:Rleg2_6561 3.1e-14 monosaccharide-transporting ATPase K02057; Psort location: CytoplasmicMembrane, score: 10.00; Belongs to the binding-protein-dependent transport system permease family.
       0.401
CmpC
ABC transporter, ATP-binding protein; KEGG: ssg:Selsp_0672 8.3e-70 Phosphonate-transporting ATPase K05833; Psort location: CytoplasmicMembrane, score: 8.78.
       0.401
Your Current Organism:
Gemella haemolysans
NCBI taxonomy Id: 1379
Other names: ATCC 10379, CCUG 37985, CIP 101126, G. haemolysans, LMG 18984, LMG:18984, NCTC 12968, Neisseria haemolysans
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