STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXB63088.1Hypothetical protein; Psort location: CytoplasmicMembrane, score: 10.00. (98 aa)    
Predicted Functional Partners:
nanE-2
N-acetylmannosamine-6-P epimerase; Converts N-acetylmannosamine-6-phosphate (ManNAc-6-P) to N- acetylglucosamine-6-phosphate (GlcNAc-6-P).
       0.773
YcjP
ABC transporter, permease protein; KEGG: bcv:Bcav_3574 2.3e-51 monosaccharide-transporting ATPase K10190; Psort location: CytoplasmicMembrane, score: 10.00.
       0.773
UgpA
KEGG: scl:sce9265 9.9e-35 ABC transporter permease; Psort location: CytoplasmicMembrane, score: 10.00.
       0.762
KXB63092.1
ABC transporter, solute-binding protein; KEGG: snc:HMPREF0837_10106 4.3e-05 maltose/maltodextrin ABC transporter ATP-binding protein K10108.
       0.564
UgpC
ABC transporter, ATP-binding protein; KEGG: bya:BANAU_3786 3.1e-125 msmX; protein MsmX K10112; Psort location: CytoplasmicMembrane, score: 9.96; Belongs to the ABC transporter superfamily.
       0.453
Your Current Organism:
Gemella haemolysans
NCBI taxonomy Id: 1379
Other names: ATCC 10379, CCUG 37985, CIP 101126, G. haemolysans, LMG 18984, LMG:18984, NCTC 12968, Neisseria haemolysans
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