STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
YcjPABC transporter, permease protein; KEGG: bcv:Bcav_3574 2.3e-51 monosaccharide-transporting ATPase K10190; Psort location: CytoplasmicMembrane, score: 10.00. (275 aa)    
Predicted Functional Partners:
UgpA
KEGG: scl:sce9265 9.9e-35 ABC transporter permease; Psort location: CytoplasmicMembrane, score: 10.00.
 
 0.999
KXB63092.1
ABC transporter, solute-binding protein; KEGG: snc:HMPREF0837_10106 4.3e-05 maltose/maltodextrin ABC transporter ATP-binding protein K10108.
 
 
 0.985
UgpC
ABC transporter, ATP-binding protein; KEGG: bya:BANAU_3786 3.1e-125 msmX; protein MsmX K10112; Psort location: CytoplasmicMembrane, score: 9.96; Belongs to the ABC transporter superfamily.
 
 0.984
nanE-2
N-acetylmannosamine-6-P epimerase; Converts N-acetylmannosamine-6-phosphate (ManNAc-6-P) to N- acetylglucosamine-6-phosphate (GlcNAc-6-P).
  
  
 0.801
KXB63088.1
Hypothetical protein; Psort location: CytoplasmicMembrane, score: 10.00.
       0.773
FruA
KEGG: aur:HMPREF9243_1309 1.3e-181 fruA_2; PTS system fructose-specific transporter subunit IIABC; K02768 PTS system, fructose-specific IIA component; K02769 PTS system, fructose-specific IIB component K02770; Psort location: CytoplasmicMembrane, score: 10.00.
   
  
 0.648
Apu
Alpha amylase, catalytic domain protein; KEGG: ssg:Selsp_2025 7.1e-112 4-alpha-glucanotransferase K00705; Psort location: Cellwall, score: 8.97.
 
  
 0.439
PtsG
PTS system maltose-specific EIICB component; KEGG: lba:Lebu_1527 7.0e-176 PTS system alpha-glucoside-specific transporter subunit IIBC; K02749 PTS system, arbutin-like IIB component K02750; Psort location: CytoplasmicMembrane, score: 10.00.
   
  
 0.438
GlcB
Phosphotransferase system, EIIC; KEGG: eha:Ethha_0723 3.8e-113 PTS system glucose-like transporter subunit IIB; K02763 PTS system, D-glucosamine-specific IIA component; K02764 PTS system, D-glucosamine-specific IIB component K02765; Psort location: CytoplasmicMembrane, score: 10.00.
   
  
 0.438
Your Current Organism:
Gemella haemolysans
NCBI taxonomy Id: 1379
Other names: ATCC 10379, CCUG 37985, CIP 101126, G. haemolysans, LMG 18984, LMG:18984, NCTC 12968, Neisseria haemolysans
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