STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXB62849.1KEGG: lsp:Bsph_4142 2.3e-42 hypothetical protein; K00571 site-specific DNA-methyltransferase (adenine-specific). (300 aa)    
Predicted Functional Partners:
EzrA
Septation ring formation regulator EzrA; KEGG: edi:EDI_341030 2.7e-13 intracellular protein transport protein USO1; Psort location: Cytoplasmic, score: 9.89.
 
     0.773
KXB59248.1
Bacterial ABC transporter protein EcsB; Psort location: CytoplasmicMembrane, score: 10.00.
 
     0.765
KXB59339.1
Hypothetical protein; KEGG: lki:LKI_01225 9.2e-16 LexA repressor K09976; Psort location: CytoplasmicMembrane, score: 9.55.
  
     0.724
KXB57125.1
Hypothetical protein; Psort location: Cytoplasmic, score: 7.50.
  
     0.714
KXB57222.1
Competence protein CoiA-like protein; Psort location: Cytoplasmic, score: 7.50.
  
     0.692
KXB57556.1
CAAX amino terminal protease family protein; KEGG: bsr:I33_0696 2.5e-20 YdiL K07052; Psort location: CytoplasmicMembrane, score: 10.00.
 
     0.644
KXB60116.1
Hypothetical protein.
  
     0.636
recU
Recombination protein U; Endonuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves mobile four-strand junctions by introducing symmetrical nicks in paired strands. Promotes annealing of linear ssDNA with homologous dsDNA. Required for DNA repair, homologous recombination and chromosome segregation; Belongs to the RecU family.
  
     0.611
NrnA_1
DHHA1 domain protein; KEGG: gth:Geoth_0890 6.1e-74 3'(2'),5'-bisphosphate nucleotidase K06881; Psort location: Cytoplasmic, score: 7.50.
 
     0.605
KXB58082.1
YbbR-like protein; KEGG: bya:BANAU_0179 5.2e-29 ybbR; Replicase polyprotein 1ab pp1ab; Psort location: Cytoplasmic, score: 7.50.
  
     0.595
Your Current Organism:
Gemella haemolysans
NCBI taxonomy Id: 1379
Other names: ATCC 10379, CCUG 37985, CIP 101126, G. haemolysans, LMG 18984, LMG:18984, NCTC 12968, Neisseria haemolysans
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.