STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXB62870.1Hypothetical protein; KEGG: mmb:Mmol_0836 1.0e-07 N-acetylmuramoyl-L-alanine amidase K01448. (455 aa)    
Predicted Functional Partners:
gyrB
DNA gyrase, B subunit; A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner.
   
 
 0.628
KXB60117.1
LysM domain protein; KEGG: fin:KQS_00120 4.2e-06 membrane-bound lytic murein transglycosylase precursor; K08307 membrane-bound lytic murein transglycosylase D; Psort location: CytoplasmicMembrane, score: 8.28.
   
 
 0.584
KXB62869.1
Hypothetical protein.
       0.512
KXB61083.1
LPXTG-motif protein cell wall anchor domain protein; KEGG: msp:Mspyr1_22670 3.5e-23 2-oxoglutarate dehydrogenase E2 component K00658; Psort location: Cellwall, score: 9.38.
  
 
 0.422
KXB59093.1
LPXTG-motif protein cell wall anchor domain protein; KEGG: spd:SPD_0577 0.00013 zmpB; zinc metalloprotease ZmpB; K08643 zinc metalloprotease ZmpB; Psort location: Cellwall, score: 9.85.
  
 
 0.422
Your Current Organism:
Gemella haemolysans
NCBI taxonomy Id: 1379
Other names: ATCC 10379, CCUG 37985, CIP 101126, G. haemolysans, LMG 18984, LMG:18984, NCTC 12968, Neisseria haemolysans
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.