STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TehB_1KEGG: eab:ECABU_c16620 6.5e-54 tehB; tellurite resistance protein TehB. (287 aa)    
Predicted Functional Partners:
YfkJ
Putative low molecular weight protein-tyrosine-phosphatase PtpA; KEGG: lba:Lebu_2236 4.2e-59 protein tyrosine phosphatase; K01104 protein-tyrosine phosphatase; Psort location: Cytoplasmic, score: 7.50; Belongs to the low molecular weight phosphotyrosine protein phosphatase family.
       0.519
KXB62876.1
Hypothetical protein; Psort location: CytoplasmicMembrane, score: 10.00.
       0.429
YkoD_1
KEGG: snc:HMPREF0837_11004 9.7e-76 ABC transporter ATP-binding protein K02006; Psort location: CytoplasmicMembrane, score: 9.99.
       0.429
KXB62878.1
Cobalt transport protein; KEGG: sap:Sulac_1647 2.0e-05 monosaccharide-transporting ATPase K02006; Psort location: CytoplasmicMembrane, score: 10.00.
       0.429
Your Current Organism:
Gemella haemolysans
NCBI taxonomy Id: 1379
Other names: ATCC 10379, CCUG 37985, CIP 101126, G. haemolysans, LMG 18984, LMG:18984, NCTC 12968, Neisseria haemolysans
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