STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXB62879.1LytTr DNA-binding domain protein. (150 aa)    
Predicted Functional Partners:
KXB62880.1
Hypothetical protein; Psort location: CytoplasmicMembrane, score: 10.00.
 
    0.950
KXB59070.1
Hypothetical protein; KEGG: clj:CLJU_c35180 1.0e-46 two-component sensor histidine kinase; K07706 two-component system, AgrA family, sensor histidine kinase AgrC; Psort location: CytoplasmicMembrane, score: 10.00.
 
  
 0.541
MacB_1
Efflux ABC transporter, permease protein; KEGG: bya:BANAU_0335 5.2e-22 yclI; Macrolide export ATP-binding/permease protein macB K02004; Psort location: CytoplasmicMembrane, score: 10.00.
 
    0.463
KXB58388.1
LICD family protein; KEGG: sor:SOR_1654 2.7e-48 wefL; LicD superfamily protein; K07271 lipopolysaccharide cholinephosphotransferase; Psort location: Cytoplasmic, score: 7.50.
  
     0.427
Your Current Organism:
Gemella haemolysans
NCBI taxonomy Id: 1379
Other names: ATCC 10379, CCUG 37985, CIP 101126, G. haemolysans, LMG 18984, LMG:18984, NCTC 12968, Neisseria haemolysans
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