STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXB62880.1Hypothetical protein; Psort location: CytoplasmicMembrane, score: 10.00. (227 aa)    
Predicted Functional Partners:
KXB62879.1
LytTr DNA-binding domain protein.
 
    0.950
KXB59604.1
LytTr DNA-binding domain protein; KEGG: apr:Apre_1253 0.00056 5-formyltetrahydrofolate cyclo-ligase; K01934 5-formyltetrahydrofolate cyclo-ligase; Psort location: Cytoplasmic, score: 7.50.
 
    0.653
KXB59071.1
LytTr DNA-binding domain protein; KEGG: sgg:SGGBAA2069_c19630 8.6e-20 fasA1; response regulator; Psort location: Cytoplasmic, score: 9.97.
 
    0.593
KXB59080.1
KEGG: suh:SAMSHR1132_01930 1.4e-122 hypothetical protein; K01126 glycerophosphoryl diester phosphodiesterase; Psort location: CytoplasmicMembrane, score: 10.00.
 
   
 0.561
KXB59801.1
Histidine kinase; KEGG: stc:str1326 2.6e-66 hk06; sensor histidine kinase; K07778 two-component system, NarL family, sensor histidine kinase DesK; Psort location: CytoplasmicMembrane, score: 9.99.
  
  
 0.554
NreB
Histidine kinase; KEGG: bse:Bsel_2609 4.7e-33 integral membrane sensor signal transduction histidine kinase; Psort location: CytoplasmicMembrane, score: 9.51.
  
  
 0.554
KXB59381.1
Kinase domain protein; KEGG: gwc:GWCH70_1067 9.3e-110 serine/threonine protein kinase with PASTA sensor(s); K08884 serine/threonine protein kinase, bacterial; Psort location: CytoplasmicMembrane, score: 9.51.
  
    0.472
NrdE
Ribonucleoside-diphosphate reductase, alpha subunit; Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides.
   
    0.463
KXB62878.1
Cobalt transport protein; KEGG: sap:Sulac_1647 2.0e-05 monosaccharide-transporting ATPase K02006; Psort location: CytoplasmicMembrane, score: 10.00.
 
     0.457
KXB59070.1
Hypothetical protein; KEGG: clj:CLJU_c35180 1.0e-46 two-component sensor histidine kinase; K07706 two-component system, AgrA family, sensor histidine kinase AgrC; Psort location: CytoplasmicMembrane, score: 10.00.
 
     0.419
Your Current Organism:
Gemella haemolysans
NCBI taxonomy Id: 1379
Other names: ATCC 10379, CCUG 37985, CIP 101126, G. haemolysans, LMG 18984, LMG:18984, NCTC 12968, Neisseria haemolysans
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