Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| KXB62691.1 | KXB62692.1 | HMPREF3186_00359 | HMPREF3186_00360 | YhgE/Pip domain protein; KEGG: edi:EDI_048910 4.9e-09 intracellular protein transport protein USO1; Psort location: CytoplasmicMembrane, score: 10.00. | Anaerobic ribonucleoside-triphosphate reductase activating protein; Activation of anaerobic ribonucleoside-triphosphate reductase under anaerobic conditions by generation of an organic free radical, using S-adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine. | 0.497 |
| KXB62692.1 | KXB62691.1 | HMPREF3186_00360 | HMPREF3186_00359 | Anaerobic ribonucleoside-triphosphate reductase activating protein; Activation of anaerobic ribonucleoside-triphosphate reductase under anaerobic conditions by generation of an organic free radical, using S-adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine. | YhgE/Pip domain protein; KEGG: edi:EDI_048910 4.9e-09 intracellular protein transport protein USO1; Psort location: CytoplasmicMembrane, score: 10.00. | 0.497 |
| KXB62692.1 | NrdD | HMPREF3186_00360 | HMPREF3186_01595 | Anaerobic ribonucleoside-triphosphate reductase activating protein; Activation of anaerobic ribonucleoside-triphosphate reductase under anaerobic conditions by generation of an organic free radical, using S-adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine. | KEGG: efi:OG1RF_12115 1.4e-294 nrdD; anaerobic ribonucleoside-triphosphate reductase large subunit K00527; Psort location: Cytoplasmic, score: 7.50. | 0.980 |
| KXB62692.1 | RsmB | HMPREF3186_00360 | HMPREF3186_01196 | Anaerobic ribonucleoside-triphosphate reductase activating protein; Activation of anaerobic ribonucleoside-triphosphate reductase under anaerobic conditions by generation of an organic free radical, using S-adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine. | Ribosomal RNA small subunit methyltransferase B; Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA. | 0.504 |
| KXB62692.1 | folE | HMPREF3186_00360 | HMPREF3186_00999 | Anaerobic ribonucleoside-triphosphate reductase activating protein; Activation of anaerobic ribonucleoside-triphosphate reductase under anaerobic conditions by generation of an organic free radical, using S-adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine. | KEGG: sif:Sinf_1066 3.7e-51 folE; GTP cyclohydrolase I K01495. | 0.507 |
| KXB62692.1 | guaA | HMPREF3186_00360 | HMPREF3186_01582 | Anaerobic ribonucleoside-triphosphate reductase activating protein; Activation of anaerobic ribonucleoside-triphosphate reductase under anaerobic conditions by generation of an organic free radical, using S-adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine. | GMP synthase domain protein; Catalyzes the synthesis of GMP from XMP. | 0.573 |
| NrdD | KXB62692.1 | HMPREF3186_01595 | HMPREF3186_00360 | KEGG: efi:OG1RF_12115 1.4e-294 nrdD; anaerobic ribonucleoside-triphosphate reductase large subunit K00527; Psort location: Cytoplasmic, score: 7.50. | Anaerobic ribonucleoside-triphosphate reductase activating protein; Activation of anaerobic ribonucleoside-triphosphate reductase under anaerobic conditions by generation of an organic free radical, using S-adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine. | 0.980 |
| NrdD | folE | HMPREF3186_01595 | HMPREF3186_00999 | KEGG: efi:OG1RF_12115 1.4e-294 nrdD; anaerobic ribonucleoside-triphosphate reductase large subunit K00527; Psort location: Cytoplasmic, score: 7.50. | KEGG: sif:Sinf_1066 3.7e-51 folE; GTP cyclohydrolase I K01495. | 0.801 |
| RsmB | KXB62692.1 | HMPREF3186_01196 | HMPREF3186_00360 | Ribosomal RNA small subunit methyltransferase B; Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA. | Anaerobic ribonucleoside-triphosphate reductase activating protein; Activation of anaerobic ribonucleoside-triphosphate reductase under anaerobic conditions by generation of an organic free radical, using S-adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine. | 0.504 |
| RsmB | guaA | HMPREF3186_01196 | HMPREF3186_01582 | Ribosomal RNA small subunit methyltransferase B; Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA. | GMP synthase domain protein; Catalyzes the synthesis of GMP from XMP. | 0.458 |
| folE | KXB62692.1 | HMPREF3186_00999 | HMPREF3186_00360 | KEGG: sif:Sinf_1066 3.7e-51 folE; GTP cyclohydrolase I K01495. | Anaerobic ribonucleoside-triphosphate reductase activating protein; Activation of anaerobic ribonucleoside-triphosphate reductase under anaerobic conditions by generation of an organic free radical, using S-adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine. | 0.507 |
| folE | NrdD | HMPREF3186_00999 | HMPREF3186_01595 | KEGG: sif:Sinf_1066 3.7e-51 folE; GTP cyclohydrolase I K01495. | KEGG: efi:OG1RF_12115 1.4e-294 nrdD; anaerobic ribonucleoside-triphosphate reductase large subunit K00527; Psort location: Cytoplasmic, score: 7.50. | 0.801 |
| guaA | KXB62692.1 | HMPREF3186_01582 | HMPREF3186_00360 | GMP synthase domain protein; Catalyzes the synthesis of GMP from XMP. | Anaerobic ribonucleoside-triphosphate reductase activating protein; Activation of anaerobic ribonucleoside-triphosphate reductase under anaerobic conditions by generation of an organic free radical, using S-adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine. | 0.573 |
| guaA | RsmB | HMPREF3186_01582 | HMPREF3186_01196 | GMP synthase domain protein; Catalyzes the synthesis of GMP from XMP. | Ribosomal RNA small subunit methyltransferase B; Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA. | 0.458 |