STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MsbA_2ABC transporter, ATP-binding protein; KEGG: tcx:Tcr_1519 7.8e-42 Lipid A export ATP-binding/permease MsbA; K11085 ATP-binding cassette, subfamily B, bacterial MsbA; Psort location: CytoplasmicMembrane, score: 10.00. (538 aa)    
Predicted Functional Partners:
YheH_3
ABC transporter, ATP-binding protein; KEGG: bya:BANAU_0899 5.7e-94 yheH; Lipid A export ATP-binding/permease protein msbA K06147; Psort location: CytoplasmicMembrane, score: 10.00.
 
    
0.913
ArtM
Arginine ABC transporter, ATP-binding protein ArtM; KEGG: cno:NT01CX_0934 4.2e-82 ABC transporter; K02028 polar amino acid transport system ATP-binding protein; Psort location: CytoplasmicMembrane, score: 9.96.
    
0.902
ecfA
ABC transporter, ATP-binding protein; ATP-binding (A) component of a common energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates.
    
0.897
KXB61948.1
ABC transporter, ATP-binding protein; KEGG: txy:Thexy_2270 5.2e-164 xenobiotic-transporting ATPase K06147; Psort location: CytoplasmicMembrane, score: 10.00.
 
    
0.849
LolD_4
Putative bacteriocin export ABC transporter; KEGG: scp:HMPREF0833_10128 8.2e-79 ABC transporter ATP-binding protein; Psort location: CytoplasmicMembrane, score: 8.78.
    
0.838
KXB60186.1
Putative mutacin ABC transporter, ATP-binding protein MutF; KEGG: bya:BANAU_3686 2.3e-35 bcrA3; bacitracin transport ATP-binding protein BcrA K09687; Psort location: CytoplasmicMembrane, score: 8.78.
 
  0.799
metN
ABC transporter, ATP-binding protein; Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system.
 
    
0.775
KXB60184.1
KEGG: rdn:HMPREF0733_11092 2.3e-51 ABC transporter ATP-binding protein K09687; Psort location: CytoplasmicMembrane, score: 9.51.
 
  0.734
KXB58836.1
Phage tail component protein; KEGG: mel:Metbo_1876 1.4e-51 daunorubicin resistance ABC transporter ATPase subunit K09687; Psort location: CytoplasmicMembrane, score: 8.78.
 
  0.733
MetN2_3
KEGG: snc:HMPREF0837_11946 3.8e-42 ABC transporter ATP-binding protein K01990; Psort location: CytoplasmicMembrane, score: 8.78.
  
     0.711
Your Current Organism:
Gemella haemolysans
NCBI taxonomy Id: 1379
Other names: ATCC 10379, CCUG 37985, CIP 101126, G. haemolysans, LMG 18984, LMG:18984, NCTC 12968, Neisseria haemolysans
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