STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXB62697.1Sortase, SrtB family; KEGG: scf:Spaf_0023 2.9e-90 srtB; Surface protein cell wall anchor, sortase_B family; K08600 sortase B. (266 aa)    
Predicted Functional Partners:
YbjQ
Hypothetical protein; Psort location: Cytoplasmic, score: 7.50; Belongs to the UPF0145 family.
  
    0.547
KXB59390.1
LPXTG-motif protein cell wall anchor domain protein; KEGG: bta:614562 9.4e-21 CPN2; carboxypeptidase N, polypeptide 2 K13023; Psort location: Cellwall, score: 10.00.
  
  
 0.529
IsdE
Heme ABC transporter, heme-binding protein isdE.
 
  
 0.521
LplJ_3
KEGG: stn:STND_0967 6.7e-100 lipoate-protein ligase A LplA; K03800 lipoate-protein ligase A; Psort location: Cytoplasmic, score: 9.97.
       0.485
KXB59361.1
Hypothetical protein.
  
     0.457
EfeM
Imelysin.
   
    0.436
KXB59106.1
Hypothetical protein; Psort location: CytoplasmicMembrane, score: 10.00.
 
     0.427
KXB57592.1
Hypothetical protein; KEGG: snc:HMPREF0837_11378 5.6e-16 ABC transporter ATP-binding protein; Psort location: CytoplasmicMembrane, score: 10.00.
  
     0.413
KXB63080.1
Efflux ABC transporter, permease protein; KEGG: sgg:SGGBAA2069_c11620 8.6e-123 putative ABC transporter permease K02004; Psort location: CytoplasmicMembrane, score: 9.35.
  
     0.409
Your Current Organism:
Gemella haemolysans
NCBI taxonomy Id: 1379
Other names: ATCC 10379, CCUG 37985, CIP 101126, G. haemolysans, LMG 18984, LMG:18984, NCTC 12968, Neisseria haemolysans
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.