STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ErmO-methyltransferase; KEGG: bya:BANAU_2654 2.4e-47 yrrM; O-methyltransferase; Psort location: Cytoplasmic, score: 7.50. (219 aa)    
Predicted Functional Partners:
YhbU_2
KEGG: sdt:SPSE_1180 3.7e-90 peptidase, U32 family; Psort location: Cytoplasmic, score: 7.50.
  
  
 0.820
YhbU_1
Peptidase, U32 family; KEGG: bcy:Bcer98_3094 6.1e-161 peptidase U32; K08303 putative protease; Psort location: Cytoplasmic, score: 7.50.
 
  
 0.764
udk
Uridine kinase; KEGG: ssp:SSP1150 5.8e-69 uridine kinase K00876; Psort location: Cytoplasmic, score: 9.97.
  
    0.584
RecJ
single-stranded-DNA-specific exonuclease RecJ; KEGG: sha:SH1285 1.8e-131 hypothetical protein; K07462 single-stranded-DNA-specific exonuclease; Psort location: Cytoplasmic, score: 7.50.
  
    0.474
KXB57949.1
Adenylate cyclase; KEGG: suw:SATW20_10010 7.5e-21 putative adenylate cyclase; Psort location: Cytoplasmic, score: 7.50.
  
     0.438
MtnN
MTA/SAH nucleosidase; Catalyzes the irreversible cleavage of the glycosidic bond in both 5'-methylthioadenosine (MTA) and S-adenosylhomocysteine (SAH/AdoHcy) to adenine and the corresponding thioribose, 5'- methylthioribose and S-ribosylhomocysteine, respectively. Belongs to the PNP/UDP phosphorylase family. MtnN subfamily.
       0.429
greA
Transcription elongation factor GreA; Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreA releases sequences of 2 to 3 nucleotides.
       0.429
MetH
KEGG: smn:SMA_1241 8.6e-226 5,10-methylenetetrahydrofolate reductase/Homolog of homocysteine-binding domain; K00547 homocysteine S-methyltransferase; Psort location: Cytoplasmic, score: 7.50.
  
  
 0.410
Your Current Organism:
Gemella haemolysans
NCBI taxonomy Id: 1379
Other names: ATCC 10379, CCUG 37985, CIP 101126, G. haemolysans, LMG 18984, LMG:18984, NCTC 12968, Neisseria haemolysans
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