STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
YoaEIntegral membrane protein, YkoY family; KEGG: cco:CCC13826_1787 3.2e-13 S-adenosylmethionine synthetase (methionineadenosyltransferase; AdoMet synthetase; MAT); Psort location: CytoplasmicMembrane, score: 10.00. (254 aa)    
Predicted Functional Partners:
KXB62244.1
Hypothetical protein; KEGG: snc:HMPREF0837_11960 2.3e-09 ABC transporter ATP-binding protein K01990.
       0.746
KXB62245.1
Hypothetical protein; KEGG: zin:ZICARI_096 0.0018 nuoN; putative NADH:ubiquinone oxidoreductase I, membrane subunit N; K00343 NADH-quinone oxidoreductase subunit N; Psort location: CytoplasmicMembrane, score: 10.00.
       0.746
secD
Export membrane protein SecD; Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA; Belongs to the SecD/SecF family. SecD subfamily.
 
    0.572
KXB60116.1
Hypothetical protein.
 
     0.553
KXB59606.1
Hypothetical protein; KEGG: thg:TCELL_0492 0.0075 RNA polymerase Rpb4; K03051 DNA-directed RNA polymerase subunit F; Psort location: CytoplasmicMembrane, score: 9.87.
  
     0.539
KXB62247.1
Fibronectin-binding protein A; KEGG: tva:TVAG_387410 6.9e-09 viral A-type inclusion protein; K02331 DNA polymerase phi subunit; Psort location: Cytoplasmic, score: 7.50.
     
 0.501
KXB57583.1
KEGG: oih:OB1684 1.2e-11 hypothetical protein; K07107 acyl-CoA thioester hydrolase.
 
     0.463
BrnQ_1
Branched-chain amino acid transport system II carrier protein; Component of the transport system for branched-chain amino acids.
       0.461
KXB62248.1
Putative azaleucine resistance protein AzlC; KEGG: apb:SAR116_0734 2.7e-16 AzlC-like protein; Psort location: CytoplasmicMembrane, score: 10.00.
       0.438
KXB62249.1
KEGG: apb:SAR116_0735 0.00086 branched-chain amino acid transport; Psort location: CytoplasmicMembrane, score: 10.00.
       0.438
Your Current Organism:
Gemella haemolysans
NCBI taxonomy Id: 1379
Other names: ATCC 10379, CCUG 37985, CIP 101126, G. haemolysans, LMG 18984, LMG:18984, NCTC 12968, Neisseria haemolysans
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