STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXB62253.1KEGG: apb:SAR116_0013 0.0051 BadM/Rrf2 family transcriptional regulator; Psort location: Cytoplasmic, score: 7.50. (167 aa)    
Predicted Functional Partners:
NifU
SUF system FeS assembly protein, NifU family; KEGG: pfe:PSF113_1013 5.6e-09 iscU; protein IscU K04488; Psort location: Cytoplasmic, score: 7.50.
  
  
 0.565
NifS
KEGG: apr:Apre_0565 2.5e-68 class V aminotransferase; K04487 cysteine desulfurase; Psort location: Cytoplasmic, score: 9.97.
  
  
 0.564
IscS_2
KEGG: sdt:SPSE_1083 2.3e-90 class V aminotransferase; K04487 cysteine desulfurase; Psort location: Cytoplasmic, score: 9.97.
  
  
 0.564
RlmL
Hypothetical protein; KEGG: mcl:MCCL_1093 1.9e-125 hypothetical protein; K07444 putative N6-adenine-specific DNA methylase; Psort location: Cytoplasmic, score: 7.50; Belongs to the methyltransferase superfamily.
       0.562
KXB62239.1
Phosphotransferase enzyme family protein; KEGG: suq:HMPREF0772_11403 6.1e-58 kanamycin kinase; Psort location: Cytoplasmic, score: 7.50.
 
     0.506
Your Current Organism:
Gemella haemolysans
NCBI taxonomy Id: 1379
Other names: ATCC 10379, CCUG 37985, CIP 101126, G. haemolysans, LMG 18984, LMG:18984, NCTC 12968, Neisseria haemolysans
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.