Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| GpsB | KXB57125.1 | HMPREF3186_01681 | HMPREF3186_01822 | Putative cell cycle protein GpsB; Divisome component that associates with the complex late in its assembly, after the Z-ring is formed, and is dependent on DivIC and PBP2B for its recruitment to the divisome. Together with EzrA, is a key component of the system that regulates PBP1 localization during cell cycle progression. Its main role could be the removal of PBP1 from the cell pole after pole maturation is completed. Also contributes to the recruitment of PBP1 to the division complex. Not essential for septum formation. | Hypothetical protein; Psort location: Cytoplasmic, score: 7.50. | 0.489 |
| GpsB | KXB59248.1 | HMPREF3186_01681 | HMPREF3186_01235 | Putative cell cycle protein GpsB; Divisome component that associates with the complex late in its assembly, after the Z-ring is formed, and is dependent on DivIC and PBP2B for its recruitment to the divisome. Together with EzrA, is a key component of the system that regulates PBP1 localization during cell cycle progression. Its main role could be the removal of PBP1 from the cell pole after pole maturation is completed. Also contributes to the recruitment of PBP1 to the division complex. Not essential for septum formation. | Bacterial ABC transporter protein EcsB; Psort location: CytoplasmicMembrane, score: 10.00. | 0.597 |
| GpsB | KXB62262.1 | HMPREF3186_01681 | HMPREF3186_00438 | Putative cell cycle protein GpsB; Divisome component that associates with the complex late in its assembly, after the Z-ring is formed, and is dependent on DivIC and PBP2B for its recruitment to the divisome. Together with EzrA, is a key component of the system that regulates PBP1 localization during cell cycle progression. Its main role could be the removal of PBP1 from the cell pole after pole maturation is completed. Also contributes to the recruitment of PBP1 to the division complex. Not essential for septum formation. | CvpA family protein; Psort location: CytoplasmicMembrane, score: 10.00. | 0.608 |
| GpsB | KXB63120.1 | HMPREF3186_01681 | HMPREF3186_00306 | Putative cell cycle protein GpsB; Divisome component that associates with the complex late in its assembly, after the Z-ring is formed, and is dependent on DivIC and PBP2B for its recruitment to the divisome. Together with EzrA, is a key component of the system that regulates PBP1 localization during cell cycle progression. Its main role could be the removal of PBP1 from the cell pole after pole maturation is completed. Also contributes to the recruitment of PBP1 to the division complex. Not essential for septum formation. | Hypothetical protein; Psort location: Cytoplasmic, score: 7.50. | 0.547 |
| GpsB | LipL | HMPREF3186_01681 | HMPREF3186_01136 | Putative cell cycle protein GpsB; Divisome component that associates with the complex late in its assembly, after the Z-ring is formed, and is dependent on DivIC and PBP2B for its recruitment to the divisome. Together with EzrA, is a key component of the system that regulates PBP1 localization during cell cycle progression. Its main role could be the removal of PBP1 from the cell pole after pole maturation is completed. Also contributes to the recruitment of PBP1 to the division complex. Not essential for septum formation. | Hypothetical protein; KEGG: spb:M28_Spy0906 2.7e-48 lipoate-protein ligase A K01932; Psort location: Cytoplasmic, score: 7.50. | 0.426 |
| KXB57125.1 | GpsB | HMPREF3186_01822 | HMPREF3186_01681 | Hypothetical protein; Psort location: Cytoplasmic, score: 7.50. | Putative cell cycle protein GpsB; Divisome component that associates with the complex late in its assembly, after the Z-ring is formed, and is dependent on DivIC and PBP2B for its recruitment to the divisome. Together with EzrA, is a key component of the system that regulates PBP1 localization during cell cycle progression. Its main role could be the removal of PBP1 from the cell pole after pole maturation is completed. Also contributes to the recruitment of PBP1 to the division complex. Not essential for septum formation. | 0.489 |
| KXB57125.1 | KXB59248.1 | HMPREF3186_01822 | HMPREF3186_01235 | Hypothetical protein; Psort location: Cytoplasmic, score: 7.50. | Bacterial ABC transporter protein EcsB; Psort location: CytoplasmicMembrane, score: 10.00. | 0.661 |
| KXB57125.1 | KXB62262.1 | HMPREF3186_01822 | HMPREF3186_00438 | Hypothetical protein; Psort location: Cytoplasmic, score: 7.50. | CvpA family protein; Psort location: CytoplasmicMembrane, score: 10.00. | 0.681 |
| KXB57125.1 | KXB63120.1 | HMPREF3186_01822 | HMPREF3186_00306 | Hypothetical protein; Psort location: Cytoplasmic, score: 7.50. | Hypothetical protein; Psort location: Cytoplasmic, score: 7.50. | 0.482 |
| KXB57125.1 | KXB63618.1 | HMPREF3186_01822 | HMPREF3186_00096 | Hypothetical protein; Psort location: Cytoplasmic, score: 7.50. | Hypothetical protein; Psort location: Cytoplasmic, score: 7.50; Belongs to the UPF0356 family. | 0.745 |
| KXB57125.1 | LipL | HMPREF3186_01822 | HMPREF3186_01136 | Hypothetical protein; Psort location: Cytoplasmic, score: 7.50. | Hypothetical protein; KEGG: spb:M28_Spy0906 2.7e-48 lipoate-protein ligase A K01932; Psort location: Cytoplasmic, score: 7.50. | 0.469 |
| KXB59248.1 | GpsB | HMPREF3186_01235 | HMPREF3186_01681 | Bacterial ABC transporter protein EcsB; Psort location: CytoplasmicMembrane, score: 10.00. | Putative cell cycle protein GpsB; Divisome component that associates with the complex late in its assembly, after the Z-ring is formed, and is dependent on DivIC and PBP2B for its recruitment to the divisome. Together with EzrA, is a key component of the system that regulates PBP1 localization during cell cycle progression. Its main role could be the removal of PBP1 from the cell pole after pole maturation is completed. Also contributes to the recruitment of PBP1 to the division complex. Not essential for septum formation. | 0.597 |
| KXB59248.1 | KXB57125.1 | HMPREF3186_01235 | HMPREF3186_01822 | Bacterial ABC transporter protein EcsB; Psort location: CytoplasmicMembrane, score: 10.00. | Hypothetical protein; Psort location: Cytoplasmic, score: 7.50. | 0.661 |
| KXB59248.1 | KXB62262.1 | HMPREF3186_01235 | HMPREF3186_00438 | Bacterial ABC transporter protein EcsB; Psort location: CytoplasmicMembrane, score: 10.00. | CvpA family protein; Psort location: CytoplasmicMembrane, score: 10.00. | 0.635 |
| KXB59248.1 | KXB63618.1 | HMPREF3186_01235 | HMPREF3186_00096 | Bacterial ABC transporter protein EcsB; Psort location: CytoplasmicMembrane, score: 10.00. | Hypothetical protein; Psort location: Cytoplasmic, score: 7.50; Belongs to the UPF0356 family. | 0.561 |
| KXB59248.1 | LipL | HMPREF3186_01235 | HMPREF3186_01136 | Bacterial ABC transporter protein EcsB; Psort location: CytoplasmicMembrane, score: 10.00. | Hypothetical protein; KEGG: spb:M28_Spy0906 2.7e-48 lipoate-protein ligase A K01932; Psort location: Cytoplasmic, score: 7.50. | 0.429 |
| KXB62262.1 | GpsB | HMPREF3186_00438 | HMPREF3186_01681 | CvpA family protein; Psort location: CytoplasmicMembrane, score: 10.00. | Putative cell cycle protein GpsB; Divisome component that associates with the complex late in its assembly, after the Z-ring is formed, and is dependent on DivIC and PBP2B for its recruitment to the divisome. Together with EzrA, is a key component of the system that regulates PBP1 localization during cell cycle progression. Its main role could be the removal of PBP1 from the cell pole after pole maturation is completed. Also contributes to the recruitment of PBP1 to the division complex. Not essential for septum formation. | 0.608 |
| KXB62262.1 | KXB57125.1 | HMPREF3186_00438 | HMPREF3186_01822 | CvpA family protein; Psort location: CytoplasmicMembrane, score: 10.00. | Hypothetical protein; Psort location: Cytoplasmic, score: 7.50. | 0.681 |
| KXB62262.1 | KXB59248.1 | HMPREF3186_00438 | HMPREF3186_01235 | CvpA family protein; Psort location: CytoplasmicMembrane, score: 10.00. | Bacterial ABC transporter protein EcsB; Psort location: CytoplasmicMembrane, score: 10.00. | 0.635 |
| KXB62262.1 | KXB63120.1 | HMPREF3186_00438 | HMPREF3186_00306 | CvpA family protein; Psort location: CytoplasmicMembrane, score: 10.00. | Hypothetical protein; Psort location: Cytoplasmic, score: 7.50. | 0.623 |
page 1 of 3