STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FeuCIron chelate uptake ABC transporter, FeCT family, permease protein; KEGG: bsr:I33_3446 2.0e-43 ferrichrome transport system permease protein FhuG K02015; Psort location: CytoplasmicMembrane, score: 10.00; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily. (324 aa)    
Predicted Functional Partners:
YusV
Putative ferrichrome ABC transporter, ATP-binding protein FhuC; KEGG: bca:BCE_4668 1.1e-58 iron ABC transporter ATP-binding protein; K02013 iron complex transport system ATP-binding protein; Psort location: CytoplasmicMembrane, score: 9.96.
 
 0.999
IsdE
Heme ABC transporter, heme-binding protein isdE.
 
 
 0.982
KXB62198.1
KEGG: ava:Ava_1873 2.0e-06 peptidoglycan binding domain-containing protein; Psort location: Cellwall, score: 9.98.
  
 
 0.871
KXB59390.1
LPXTG-motif protein cell wall anchor domain protein; KEGG: bta:614562 9.4e-21 CPN2; carboxypeptidase N, polypeptide 2 K13023; Psort location: Cellwall, score: 10.00.
  
  
 0.611
KXB62199.1
Tat pathway signal sequence domain protein; Psort location: CytoplasmicMembrane, score: 9.87.
       0.554
FhuC
Putative manganese transport system ATP-binding protein MntA; KEGG: snc:HMPREF0837_11891 1.3e-80 ABC transporter ATP-binding protein K09820; Psort location: CytoplasmicMembrane, score: 8.78.
    
 0.477
EfeU
Iron permease FTR1 family protein; KEGG: ccv:CCV52592_0433 3.9e-25 fumarate hydratase class II K01679; Psort location: CytoplasmicMembrane, score: 10.00.
  
  
 0.446
ribA
3,4-dihydroxy-2-butanone-4-phosphate synthase; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate; Belongs to the GTP cyclohydrolase II family. In the N-terminal section; belongs to the DHBP synthase family.
  
  
 0.428
Your Current Organism:
Gemella haemolysans
NCBI taxonomy Id: 1379
Other names: ATCC 10379, CCUG 37985, CIP 101126, G. haemolysans, LMG 18984, LMG:18984, NCTC 12968, Neisseria haemolysans
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