STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SaeSATPase/histidine kinase/DNA gyrase B/HSP90 domain protein; KEGG: sgo:SGO_1180 6.3e-104 histidine kinase; K10681 two-component system, OmpR family, sensor histidine kinase SaeS; Psort location: CytoplasmicMembrane, score: 9.96. (349 aa)    
Predicted Functional Partners:
SaeR
KEGG: fal:FRAAL1628 7.7e-35 response regulator in two-component regulatory system K05971; Psort location: Cytoplasmic, score: 9.95.
 0.997
WalR
Transcriptional regulatory protein WalR; KEGG: bbp:BBPR_1604 4.7e-51 two-component response regulator K07776; Psort location: Cytoplasmic, score: 9.97.
 
 0.902
CopR
Putative response regulator ArlR; KEGG: cnc:CNE_2c16400 4.2e-43 czcS; sensor protein CzcS K07665; Psort location: Cytoplasmic, score: 9.67.
 
 0.898
ArlR_1
KEGG: rha:RHA1_ro05622 8.3e-38 response regulator (protein-glutamate methylesterase) K07669; Psort location: Cytoplasmic, score: 9.67.
 
 0.881
SrrA
Putative transcriptional regulatory protein ResD; KEGG: fal:FRAAL1628 7.3e-39 response regulator in two-component regulatory system K05971; Psort location: Cytoplasmic, score: 9.97.
 
 0.868
GraR
Putative response regulator protein GraR; KEGG: pmc:P9515_01621 2.3e-26 two-component response regulator K11329; Psort location: Cytoplasmic, score: 9.67.
 
 0.813
ArlR_2
KEGG: rha:RHA1_ro05622 1.4e-21 response regulator (protein-glutamate methylesterase) K07669; Psort location: Cytoplasmic, score: 9.97.
 
 
 0.784
CsoR
Hypothetical protein; Psort location: Cytoplasmic, score: 7.50.
       0.775
CheY
Putative chemotaxis protein CheY; KEGG: cbk:CLL_A0802 1.7e-14 sporulation initiation phosphotransferase F K03413; Psort location: Cytoplasmic, score: 9.97.
 
 
 0.546
PbpX
KEGG: mcl:MCCL_0753 1.1e-154 pbpA; penicillin-binding protein 1; K12552 penicillin-binding protein 1; Psort location: CytoplasmicMembrane, score: 9.51.
 
  
 0.472
Your Current Organism:
Gemella haemolysans
NCBI taxonomy Id: 1379
Other names: ATCC 10379, CCUG 37985, CIP 101126, G. haemolysans, LMG 18984, LMG:18984, NCTC 12968, Neisseria haemolysans
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