STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXB62155.1Hypothetical protein. (174 aa)    
Predicted Functional Partners:
mrnC
RNase3 domain protein; Involved in correct processing of both the 5' and 3' ends of 23S rRNA precursor. Processes 30S rRNA precursor transcript even in absence of ribonuclease 3 (Rnc); Rnc processes 30S rRNA into smaller rRNA precursors; Belongs to the MrnC RNase family.
 
  
 0.950
KXB62153.1
RNA methyltransferase, TrmH family, group 3; KEGG: mcl:MCCL_1876 5.3e-68 hypothetical protein; K03218 23S rRNA (guanosine2251-2'-O)-methyltransferase; Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family.
  
  
 0.920
cysS
cysteine--tRNA ligase; KEGG: suk:SAA6008_00536 4.9e-159 cysS; cysteinyl-tRNA synthetase; K01883 cysteinyl-tRNA synthetase; Psort location: Cytoplasmic, score: 9.97; Belongs to the class-I aminoacyl-tRNA synthetase family.
  
    0.890
KXB62154.1
Acetyltransferase, GNAT family; KEGG: xbo:XBJ1_3309 9.9e-19 acetyl transferase; Psort location: Cytoplasmic, score: 7.50.
       0.706
KXB61225.1
S4 domain protein; Psort location: Cytoplasmic, score: 7.50.
 
    0.628
KXB61219.1
RNA methyltransferase, TrmH family; KEGG: bmd:BMD_4730 2.9e-44 23S rRNA methyltransferase K03437; Psort location: Cytoplasmic, score: 7.50; Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family.
  
  
 0.511
KXB62239.1
Phosphotransferase enzyme family protein; KEGG: suq:HMPREF0772_11403 6.1e-58 kanamycin kinase; Psort location: Cytoplasmic, score: 7.50.
  
     0.431
KXB58397.1
Hypothetical protein; Psort location: Cytoplasmic, score: 7.50.
  
    0.430
KXB62150.1
Hypothetical protein; KEGG: ssr:SALIVB_2089 6.0e-28 tyrosyl-tRNA synthetase; Psort location: CytoplasmicMembrane, score: 10.00.
       0.419
KXB57450.1
Ribosomal protein L7Ae; Psort location: Cytoplasmic, score: 7.50.
 
    0.408
Your Current Organism:
Gemella haemolysans
NCBI taxonomy Id: 1379
Other names: ATCC 10379, CCUG 37985, CIP 101126, G. haemolysans, LMG 18984, LMG:18984, NCTC 12968, Neisseria haemolysans
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.