STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXB62162.1Polysaccharide deacetylase; KEGG: ssa:SSA_0963 1.5e-100 peptidoglycan N-acetylglucosamine deacetylase A K01463; Psort location: Extracellular, score: 9.73. (458 aa)    
Predicted Functional Partners:
cinA
Competence/damage-inducible protein CinA domain protein; KEGG: cco:CCC13826_0279 4.5e-15 fadD; long-chain-fatty-acid--CoA ligase K03743; Psort location: CytoplasmicMembrane, score: 8.16; Belongs to the CinA family.
     
 0.719
KXB63487.1
KEGG: spd:SPD_0098 2.3e-97 glycosyl transferase family protein K00754; Psort location: CytoplasmicMembrane, score: 10.00.
 
  
 0.664
PgaC
KEGG: cbl:CLK_2000 2.1e-34 glycosyl transferase family protein; Psort location: Cytoplasmic, score: 7.50.
  
  
 0.609
KXB62160.1
Hypothetical protein; KEGG: mpe:MYPE6470 0.0039 DNA topoisomerase IV subunit A; K02621 topoisomerase IV subunit A.
       0.434
KXB63583.1
LICD family protein; KEGG: cls:CXIVA_25380 2.5e-42 hypothetical protein; K07271 lipopolysaccharide cholinephosphotransferase; Psort location: CytoplasmicMembrane, score: 10.00.
 
  
 0.424
KXB59381.1
Kinase domain protein; KEGG: gwc:GWCH70_1067 9.3e-110 serine/threonine protein kinase with PASTA sensor(s); K08884 serine/threonine protein kinase, bacterial; Psort location: CytoplasmicMembrane, score: 9.51.
 
  
 0.417
Your Current Organism:
Gemella haemolysans
NCBI taxonomy Id: 1379
Other names: ATCC 10379, CCUG 37985, CIP 101126, G. haemolysans, LMG 18984, LMG:18984, NCTC 12968, Neisseria haemolysans
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.