STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TrkGCation transport protein; KEGG: ssr:SALIVB_0283 2.6e-91 DNA polymerase IV K03498; Psort location: CytoplasmicMembrane, score: 10.00. (488 aa)    
Predicted Functional Partners:
TrkA
Putative potassium transporter peripheral membrane component; KEGG: scp:HMPREF0833_11023 4.2e-82 ktrA; Trk family potassium (K+) transporter, NAD+ binding protein K03499; Psort location: CytoplasmicMembrane, score: 8.78.
 
 
 0.983
KXB60316.1
Chloride transporter, ClC family; KEGG: cpr:CPR_1400 1.1e-83 chloride channel protein K01529; Psort location: CytoplasmicMembrane, score: 10.00.
  
 
 0.820
RsmB
Ribosomal RNA small subunit methyltransferase B; Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA.
  
  
 0.575
guaB
Inosine-5'-monophosphate dehydrogenase; Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate-limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth. Belongs to the IMPDH/GMPR family.
     
 0.536
MrpA
KEGG: esi:Exig_1696 5.0e-166 monovalent cation/H+ antiporter subunit A K05565; Psort location: CytoplasmicMembrane, score: 10.00.
     
 0.490
KXB62205.1
Putative Na+/H+ antiporter; KEGG: tgo:TGME49_105180 4.4e-10 sodium/hydrogen exchanger, putative; Psort location: CytoplasmicMembrane, score: 10.00.
   
 
 0.410
Your Current Organism:
Gemella haemolysans
NCBI taxonomy Id: 1379
Other names: ATCC 10379, CCUG 37985, CIP 101126, G. haemolysans, LMG 18984, LMG:18984, NCTC 12968, Neisseria haemolysans
Server load: low (40%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.