STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXB62089.1ABC transporter, ATP-binding protein; KEGG: scp:HMPREF0833_11728 9.7e-76 opuCA; glycine/betaine/L-proline ABC transporter ATP-binding protein K05847; Psort location: CytoplasmicMembrane, score: 8.78. (242 aa)    
Predicted Functional Partners:
OpuCC
ABC transporter, substrate-binding protein, QAT family; KEGG: stj:SALIVA_1161 3.5e-165 glycine betaine/L-proline ABC transporter,permease/glycine betaine/L-proline-binding protein; Psort location: CytoplasmicMembrane, score: 10.00.
 0.999
KXB60184.1
KEGG: rdn:HMPREF0733_11092 2.3e-51 ABC transporter ATP-binding protein K09687; Psort location: CytoplasmicMembrane, score: 9.51.
    
0.917
LptB_3
ABC transporter, ATP-binding protein; KEGG: suq:HMPREF0772_10852 1.7e-55 ABC superfamily ATP binding cassette transporter, ABC protein; Psort location: CytoplasmicMembrane, score: 8.78.
    
0.906
KXB58768.1
ABC transporter, ATP-binding protein; KEGG: ppo:PPM_0762 6.8e-59 drrA1; spermidine/putrescine import ATP-binding protein potA; Psort location: CytoplasmicMembrane, score: 9.51.
     
0.899
GsiD_1
Putative oligopeptide ABC transporter, permease protein AppC; KEGG: bmd:BMD_1704 1.1e-44 nikC; nickel import ABC transporter permease subunit NikC K15586; Psort location: CytoplasmicMembrane, score: 10.00.
 
      0.899
ArtQ
Putative arginine ABC transporter, permease protein ArtQ; KEGG: rcm:A1E_00665 3.7e-44 sdhA; succinate dehydrogenase flavoprotein subunit K02029; Psort location: CytoplasmicMembrane, score: 9.99.
 
      0.868
KXB64337.1
ABC transporter, ATP-binding protein; KEGG: cle:Clole_4052 1.1e-90 xenobiotic-transporting ATPase K06148; Psort location: CytoplasmicMembrane, score: 10.00.
     
0.831
KXB62090.1
KEGG: llo:LLO_p0063 0.0015 putative transcriptional regulator, MarR family; K03828 putative acetyltransferase.
  
  
 0.807
KXB64331.1
ABC transporter, ATP-binding protein; KEGG: ssr:SALIVB_0212 5.3e-68 msbA; lipid A export ATP-binding/permease msbA; Psort location: CytoplasmicMembrane, score: 10.00.
 
    
0.795
KXB58776.1
ABC transporter, ATP-binding protein; KEGG: cle:Clole_4126 1.8e-51 xenobiotic-transporting ATPase; Psort location: CytoplasmicMembrane, score: 10.00.
 
    
0.710
Your Current Organism:
Gemella haemolysans
NCBI taxonomy Id: 1379
Other names: ATCC 10379, CCUG 37985, CIP 101126, G. haemolysans, LMG 18984, LMG:18984, NCTC 12968, Neisseria haemolysans
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