STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
YheH_2KEGG: cbk:CLL_A2952 4.6e-195 lipid A export ATP-binding/permease protein MsbA K06147; Psort location: CytoplasmicMembrane, score: 10.00. (596 aa)    
Predicted Functional Partners:
ecfA
ABC transporter, ATP-binding protein; ATP-binding (A) component of a common energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates.
     
0.900
metN
ABC transporter, ATP-binding protein; Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system.
 
     
0.899
KXB64335.1
ABC transporter, ATP-binding protein; KEGG: cle:Clole_4126 1.3e-50 xenobiotic-transporting ATPase; Psort location: CytoplasmicMembrane, score: 10.00.
 
    
0.856
KXB61948.1
ABC transporter, ATP-binding protein; KEGG: txy:Thexy_2270 5.2e-164 xenobiotic-transporting ATPase K06147; Psort location: CytoplasmicMembrane, score: 10.00.
 
   
0.846
KXB61947.1
Transcriptional regulator, MarR family; KEGG: cbj:H04402_02264 3.6e-05 5-carboxymethyl-2-oxo-hex-3-ene-1,7-dioate decarboxylase; Psort location: Cytoplasmic, score: 7.50.
  
  
 0.779
MsbA_1
ABC transporter, ATP-binding protein; KEGG: ssr:SALIVB_0212 1.2e-47 msbA; lipid A export ATP-binding/permease msbA; Psort location: CytoplasmicMembrane, score: 10.00.
 
 
  
0.584
UgpC
ABC transporter, ATP-binding protein; KEGG: bya:BANAU_3786 3.1e-125 msmX; protein MsmX K10112; Psort location: CytoplasmicMembrane, score: 9.96; Belongs to the ABC transporter superfamily.
 
   
0.527
KXB61950.1
KEGG: pfe:PSF113_1990 5.6e-09 MarR family transcriptional regulator; Psort location: Cytoplasmic, score: 9.67.
  
  
 0.498
dtd
D-tyrosyl-tRNA(Tyr) deacylase; An aminoacyl-tRNA editing enzyme that deacylates mischarged D-aminoacyl-tRNAs. Also deacylates mischarged glycyl-tRNA(Ala), protecting cells against glycine mischarging by AlaRS. Acts via tRNA- based rather than protein-based catalysis; rejects L-amino acids rather than detecting D-amino acids in the active site. By recycling D- aminoacyl-tRNA to D-amino acids and free tRNA molecules, this enzyme counteracts the toxicity associated with the formation of D-aminoacyl- tRNA entities in vivo and helps enforce protein L-homochirality. Belongs to the DTD family.
  
    0.486
RelA_2
GTP diphosphokinase; In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance.
  
    0.485
Your Current Organism:
Gemella haemolysans
NCBI taxonomy Id: 1379
Other names: ATCC 10379, CCUG 37985, CIP 101126, G. haemolysans, LMG 18984, LMG:18984, NCTC 12968, Neisseria haemolysans
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