STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXB61959.1Tetratricopeptide repeat protein; KEGG: sax:USA300HOU_1551 1.0e-22 peptidase; Psort location: CytoplasmicMembrane, score: 10.00. (479 aa)    
Predicted Functional Partners:
YqgQ
Hypothetical protein.
     
 0.780
KXB61962.1
Cell cycle protein, FtsW/RodA/SpoVE family; KEGG: hiq:CGSHiGG_09345 5.4e-43 murD; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase K03588; Psort location: CytoplasmicMembrane, score: 10.00; Belongs to the SEDS family.
       0.748
KXB61961.1
Hypothetical protein; Psort location: Cytoplasmic, score: 7.50; Belongs to the UPF0358 family.
       0.747
Crr
KEGG: bmd:BMD_4004 3.9e-40 ptbA; sugar phosphotransferase system, glucose subfamily, IIA component; K02777 PTS system, glucose-specific IIA component; Psort location: CytoplasmicMembrane, score: 8.78.
       0.642
TatAy
Twin arginine-targeting protein translocase, TatA/E family; Psort location: CytoplasmicMembrane, score: 9.99.
   
 
 0.636
KXB63118.1
KEGG: cbe:Cbei_0291 4.1e-29 5-formyltetrahydrofolate cyclo-ligase; K01934 5-formyltetrahydrofolate cyclo-ligase; Belongs to the 5-formyltetrahydrofolate cyclo-ligase family.
  
    0.542
KXB61946.1
N-acetylmuramoyl-L-alanine amidase; KEGG: suu:M013TW_1652 3.9e-25 LytH protein; K01448 N-acetylmuramoyl-L-alanine amidase.
  
 
 0.498
KXB63367.1
Cell wall-binding repeat protein; KEGG: sjj:SPJ_0618 9.0e-09 putative endo-beta-N-acetylglucosaminidase (Murein hydrolase); Psort location: CytoplasmicMembrane, score: 9.87.
  
   0.489
KXB63355.1
N-acetylmuramoyl-L-alanine amidase; KEGG: sui:SSUJS14_1257 4.9e-48 cell wall hydrolase/autolysin; K01448 N-acetylmuramoyl-L-alanine amidase; Psort location: Cellwall, score: 8.75.
  
   0.489
KXB61572.1
M26 IgA1-specific Metallo-endopeptidase region; KEGG: snp:SPAP_0653 0. hypothetical protein; K08643 zinc metalloprotease ZmpB; Psort location: Cellwall, score: 9.20.
  
   0.489
Your Current Organism:
Gemella haemolysans
NCBI taxonomy Id: 1379
Other names: ATCC 10379, CCUG 37985, CIP 101126, G. haemolysans, LMG 18984, LMG:18984, NCTC 12968, Neisseria haemolysans
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