STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXB61981.1Metallo-beta-lactamase domain protein; KEGG: ppo:PPM_0588 2.5e-09 M1-763; beta-lactamase-like protein. (239 aa)    
Predicted Functional Partners:
KXB61982.1
Nodulation efficiency protein D; KEGG: bpu:BPUM_2272 7.4e-30 yqeZ; serine peptidase K07403; Psort location: CytoplasmicMembrane, score: 10.00.
       0.776
KXB61983.1
Hypothetical protein; Psort location: Cytoplasmic, score: 7.50.
       0.705
KXB61984.1
Putative phage shock protein B; KEGG: mok:Metok_0737 0.00079 DNA-directed DNA polymerase K02323.
       0.637
KXB61985.1
Hypothetical protein.
       0.637
guaA
GMP synthase domain protein; Catalyzes the synthesis of GMP from XMP.
  
 
 0.577
KXB61986.1
Hypothetical protein; Psort location: CytoplasmicMembrane, score: 10.00.
       0.489
ybeY
Translation metalloprotein YbeY; Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA.
  
 
 0.489
KXB61980.1
Hypothetical protein; Psort location: Cytoplasmic, score: 7.50.
       0.449
rsmH
S-adenosyl-methyltransferase MraW; Specifically methylates the N4 position of cytidine in position 1402 (C1402) of 16S rRNA.
  
   0.445
truA
tRNA pseudouridine synthase A; Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs.
   
 
 0.437
Your Current Organism:
Gemella haemolysans
NCBI taxonomy Id: 1379
Other names: ATCC 10379, CCUG 37985, CIP 101126, G. haemolysans, LMG 18984, LMG:18984, NCTC 12968, Neisseria haemolysans
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