STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXB61982.1Nodulation efficiency protein D; KEGG: bpu:BPUM_2272 7.4e-30 yqeZ; serine peptidase K07403; Psort location: CytoplasmicMembrane, score: 10.00. (207 aa)    
Predicted Functional Partners:
KXB61983.1
Hypothetical protein; Psort location: Cytoplasmic, score: 7.50.
 
  
 0.977
KXB61981.1
Metallo-beta-lactamase domain protein; KEGG: ppo:PPM_0588 2.5e-09 M1-763; beta-lactamase-like protein.
       0.776
KXB61984.1
Putative phage shock protein B; KEGG: mok:Metok_0737 0.00079 DNA-directed DNA polymerase K02323.
       0.637
KXB61985.1
Hypothetical protein.
       0.637
KXB61986.1
Hypothetical protein; Psort location: CytoplasmicMembrane, score: 10.00.
       0.489
KXB61980.1
Hypothetical protein; Psort location: Cytoplasmic, score: 7.50.
       0.449
Pdp
KEGG: lba:Lebu_0788 3.5e-158 pyrimidine-nucleoside phosphorylase; K00756 pyrimidine-nucleoside phosphorylase.
       0.426
deoC
Deoxyribose-phosphate aldolase; Catalyzes a reversible aldol reaction between acetaldehyde and D-glyceraldehyde 3-phosphate to generate 2-deoxy-D-ribose 5- phosphate; Belongs to the DeoC/FbaB aldolase family. DeoC type 1 subfamily.
       0.408
Your Current Organism:
Gemella haemolysans
NCBI taxonomy Id: 1379
Other names: ATCC 10379, CCUG 37985, CIP 101126, G. haemolysans, LMG 18984, LMG:18984, NCTC 12968, Neisseria haemolysans
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