STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXB61351.1Hypothetical protein; KEGG: bqy:MUS_1155 9.4e-30 yitW; serine O-acetyltransferase; Psort location: Cytoplasmic, score: 7.50. (108 aa)    
Predicted Functional Partners:
YurY
FeS assembly ATPase SufC; KEGG: bya:BANAU_3169 3.4e-96 sufC; phosphate import ATP-binding protein pstB K09013; Psort location: Cytoplasmic, score: 9.97.
 
  
 0.678
rpiA
Ribose 5-phosphate isomerase A; Catalyzes the reversible conversion of ribose-5-phosphate to ribulose 5-phosphate.
       0.671
NifU
SUF system FeS assembly protein, NifU family; KEGG: pfe:PSF113_1013 5.6e-09 iscU; protein IscU K04488; Psort location: Cytoplasmic, score: 7.50.
  
    0.619
tyrS
tyrosine--tRNA ligase; Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two- step reaction: tyrosine is first activated by ATP to form Tyr-AMP and then transferred to the acceptor end of tRNA(Tyr); Belongs to the class-I aminoacyl-tRNA synthetase family. TyrS type 1 subfamily.
       0.576
KXB59363.1
KEGG: suc:ECTR2_773 1.8e-28 sufB; feS assembly protein SufB K09014; Psort location: Cytoplasmic, score: 7.50.
 
   
 0.567
Your Current Organism:
Gemella haemolysans
NCBI taxonomy Id: 1379
Other names: ATCC 10379, CCUG 37985, CIP 101126, G. haemolysans, LMG 18984, LMG:18984, NCTC 12968, Neisseria haemolysans
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.