STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EcfA2_1ABC transporter, ATP-binding protein; KEGG: cle:Clole_0141 2.6e-18 sugar ABC transporter ATPase K09687; Psort location: CytoplasmicMembrane, score: 9.51. (237 aa)    
Predicted Functional Partners:
YjiR
KEGG: sgg:SGGBAA2069_c11800 2.1e-12 GntR family transcriptional regulator K00375; Psort location: Cytoplasmic, score: 7.50.
 
     0.819
KXB61331.1
Hypothetical protein; KEGG: zin:ZICARI_096 0.0022 nuoN; putative NADH:ubiquinone oxidoreductase I, membrane subunit N; K00343 NADH-quinone oxidoreductase subunit N; Psort location: CytoplasmicMembrane, score: 10.00.
       0.773
KXB58842.1
ABC transporter, ATP-binding protein; KEGG: pmx:PERMA_0463 2.8e-30 manganese transport system ATP-binding protein MntA; K09817 zinc transport system ATP-binding protein; Psort location: CytoplasmicMembrane, score: 8.78.
  
     0.741
LolD_1
KEGG: scp:HMPREF0833_10812 1.2e-75 ABC transporter ATP-binding protein K02003; Psort location: CytoplasmicMembrane, score: 8.78.
  
     0.620
ecfA
ABC transporter, ATP-binding protein; ATP-binding (A) component of a common energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates.
  
     0.593
HmuV
KEGG: lru:HMPREF0538_21396 1.1e-40 zinc/iron ABC transporter ATP-binding protein K02074; Psort location: CytoplasmicMembrane, score: 9.51.
 
     0.582
MsbA_2
ABC transporter, ATP-binding protein; KEGG: tcx:Tcr_1519 7.8e-42 Lipid A export ATP-binding/permease MsbA; K11085 ATP-binding cassette, subfamily B, bacterial MsbA; Psort location: CytoplasmicMembrane, score: 10.00.
 
     0.554
KXB63117.1
KEGG: bao:BAMF_1004 2.2e-62 yhcH; ABC transporter ATP-binding protein K09687; Psort location: CytoplasmicMembrane, score: 8.78.
  
     0.551
MsbA_1
ABC transporter, ATP-binding protein; KEGG: ssr:SALIVB_0212 1.2e-47 msbA; lipid A export ATP-binding/permease msbA; Psort location: CytoplasmicMembrane, score: 10.00.
  
     0.514
LptB_3
ABC transporter, ATP-binding protein; KEGG: suq:HMPREF0772_10852 1.7e-55 ABC superfamily ATP binding cassette transporter, ABC protein; Psort location: CytoplasmicMembrane, score: 8.78.
  
     0.503
Your Current Organism:
Gemella haemolysans
NCBI taxonomy Id: 1379
Other names: ATCC 10379, CCUG 37985, CIP 101126, G. haemolysans, LMG 18984, LMG:18984, NCTC 12968, Neisseria haemolysans
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