STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXB61331.1Hypothetical protein; KEGG: zin:ZICARI_096 0.0022 nuoN; putative NADH:ubiquinone oxidoreductase I, membrane subunit N; K00343 NADH-quinone oxidoreductase subunit N; Psort location: CytoplasmicMembrane, score: 10.00. (273 aa)    
Predicted Functional Partners:
YjiR
KEGG: sgg:SGGBAA2069_c11800 2.1e-12 GntR family transcriptional regulator K00375; Psort location: Cytoplasmic, score: 7.50.
       0.773
EcfA2_1
ABC transporter, ATP-binding protein; KEGG: cle:Clole_0141 2.6e-18 sugar ABC transporter ATPase K09687; Psort location: CytoplasmicMembrane, score: 9.51.
       0.773
PgaC
KEGG: cbl:CLK_2000 2.1e-34 glycosyl transferase family protein; Psort location: Cytoplasmic, score: 7.50.
       0.464
Your Current Organism:
Gemella haemolysans
NCBI taxonomy Id: 1379
Other names: ATCC 10379, CCUG 37985, CIP 101126, G. haemolysans, LMG 18984, LMG:18984, NCTC 12968, Neisseria haemolysans
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.