Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| GpsB | KXB61224.1 | HMPREF3186_01681 | HMPREF3186_00637 | Putative cell cycle protein GpsB; Divisome component that associates with the complex late in its assembly, after the Z-ring is formed, and is dependent on DivIC and PBP2B for its recruitment to the divisome. Together with EzrA, is a key component of the system that regulates PBP1 localization during cell cycle progression. Its main role could be the removal of PBP1 from the cell pole after pole maturation is completed. Also contributes to the recruitment of PBP1 to the division complex. Not essential for septum formation. | YGGT family protein; Psort location: CytoplasmicMembrane, score: 9.55. | 0.551 |
| GpsB | KXB63145.1 | HMPREF3186_01681 | HMPREF3186_00176 | Putative cell cycle protein GpsB; Divisome component that associates with the complex late in its assembly, after the Z-ring is formed, and is dependent on DivIC and PBP2B for its recruitment to the divisome. Together with EzrA, is a key component of the system that regulates PBP1 localization during cell cycle progression. Its main role could be the removal of PBP1 from the cell pole after pole maturation is completed. Also contributes to the recruitment of PBP1 to the division complex. Not essential for septum formation. | Pyridoxal phosphate enzyme, YggS family; Pyridoxal 5'-phosphate (PLP)-binding protein, which is involved in PLP homeostasis; Belongs to the pyridoxal phosphate-binding protein YggS/PROSC family. | 0.623 |
| GpsB | ftsA | HMPREF3186_01681 | HMPREF3186_00782 | Putative cell cycle protein GpsB; Divisome component that associates with the complex late in its assembly, after the Z-ring is formed, and is dependent on DivIC and PBP2B for its recruitment to the divisome. Together with EzrA, is a key component of the system that regulates PBP1 localization during cell cycle progression. Its main role could be the removal of PBP1 from the cell pole after pole maturation is completed. Also contributes to the recruitment of PBP1 to the division complex. Not essential for septum formation. | Cell division protein FtsA; Cell division protein that is involved in the assembly of the Z ring. May serve as a membrane anchor for the Z ring. Belongs to the FtsA/MreB family. | 0.433 |
| GpsB | ftsZ | HMPREF3186_01681 | HMPREF3186_00783 | Putative cell cycle protein GpsB; Divisome component that associates with the complex late in its assembly, after the Z-ring is formed, and is dependent on DivIC and PBP2B for its recruitment to the divisome. Together with EzrA, is a key component of the system that regulates PBP1 localization during cell cycle progression. Its main role could be the removal of PBP1 from the cell pole after pole maturation is completed. Also contributes to the recruitment of PBP1 to the division complex. Not essential for septum formation. | Cell division protein FtsZ; Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity. | 0.502 |
| GpsB | sepF | HMPREF3186_01681 | HMPREF3186_00636 | Putative cell cycle protein GpsB; Divisome component that associates with the complex late in its assembly, after the Z-ring is formed, and is dependent on DivIC and PBP2B for its recruitment to the divisome. Together with EzrA, is a key component of the system that regulates PBP1 localization during cell cycle progression. Its main role could be the removal of PBP1 from the cell pole after pole maturation is completed. Also contributes to the recruitment of PBP1 to the division complex. Not essential for septum formation. | Putative cell division protein SepF; Cell division protein that is part of the divisome complex and is recruited early to the Z-ring. Probably stimulates Z-ring formation, perhaps through the cross-linking of FtsZ protofilaments. Its function overlaps with FtsA. | 0.660 |
| KXB61224.1 | GpsB | HMPREF3186_00637 | HMPREF3186_01681 | YGGT family protein; Psort location: CytoplasmicMembrane, score: 9.55. | Putative cell cycle protein GpsB; Divisome component that associates with the complex late in its assembly, after the Z-ring is formed, and is dependent on DivIC and PBP2B for its recruitment to the divisome. Together with EzrA, is a key component of the system that regulates PBP1 localization during cell cycle progression. Its main role could be the removal of PBP1 from the cell pole after pole maturation is completed. Also contributes to the recruitment of PBP1 to the division complex. Not essential for septum formation. | 0.551 |
| KXB61224.1 | KXB61225.1 | HMPREF3186_00637 | HMPREF3186_00638 | YGGT family protein; Psort location: CytoplasmicMembrane, score: 9.55. | S4 domain protein; Psort location: Cytoplasmic, score: 7.50. | 0.899 |
| KXB61224.1 | KXB61961.1 | HMPREF3186_00637 | HMPREF3186_00527 | YGGT family protein; Psort location: CytoplasmicMembrane, score: 9.55. | Hypothetical protein; Psort location: Cytoplasmic, score: 7.50; Belongs to the UPF0358 family. | 0.474 |
| KXB61224.1 | KXB63145.1 | HMPREF3186_00637 | HMPREF3186_00176 | YGGT family protein; Psort location: CytoplasmicMembrane, score: 9.55. | Pyridoxal phosphate enzyme, YggS family; Pyridoxal 5'-phosphate (PLP)-binding protein, which is involved in PLP homeostasis; Belongs to the pyridoxal phosphate-binding protein YggS/PROSC family. | 0.585 |
| KXB61224.1 | PhnD_3 | HMPREF3186_00637 | HMPREF3186_00639 | YGGT family protein; Psort location: CytoplasmicMembrane, score: 9.55. | Phosphate/phosphite/phosphonate ABC transporter, periplasmic binding protein; KEGG: ebe:B21_03937 4.3e-25 phnD; PhnD, subunit of PhnC/PhnD/PhnE alkylphosphonate ABC transporter K02044; Psort location: CytoplasmicMembrane, score: 9.55. | 0.486 |
| KXB61224.1 | corA | HMPREF3186_00637 | HMPREF3186_00633 | YGGT family protein; Psort location: CytoplasmicMembrane, score: 9.55. | Magnesium and cobalt transport protein CorA; Mediates influx of magnesium ions. Belongs to the CorA metal ion transporter (MIT) (TC 1.A.35) family. | 0.469 |
| KXB61224.1 | ftsA | HMPREF3186_00637 | HMPREF3186_00782 | YGGT family protein; Psort location: CytoplasmicMembrane, score: 9.55. | Cell division protein FtsA; Cell division protein that is involved in the assembly of the Z ring. May serve as a membrane anchor for the Z ring. Belongs to the FtsA/MreB family. | 0.431 |
| KXB61224.1 | ftsZ | HMPREF3186_00637 | HMPREF3186_00783 | YGGT family protein; Psort location: CytoplasmicMembrane, score: 9.55. | Cell division protein FtsZ; Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity. | 0.561 |
| KXB61224.1 | gatB | HMPREF3186_00637 | HMPREF3186_01471 | YGGT family protein; Psort location: CytoplasmicMembrane, score: 9.55. | aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, B subunit; Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp-tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl- tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp- tRNA(Asn) or phospho-Glu-tRNA(Gln); Belongs to the GatB/GatE family. GatB subfamily. | 0.503 |
| KXB61224.1 | sepF | HMPREF3186_00637 | HMPREF3186_00636 | YGGT family protein; Psort location: CytoplasmicMembrane, score: 9.55. | Putative cell division protein SepF; Cell division protein that is part of the divisome complex and is recruited early to the Z-ring. Probably stimulates Z-ring formation, perhaps through the cross-linking of FtsZ protofilaments. Its function overlaps with FtsA. | 0.890 |
| KXB61225.1 | KXB61224.1 | HMPREF3186_00638 | HMPREF3186_00637 | S4 domain protein; Psort location: Cytoplasmic, score: 7.50. | YGGT family protein; Psort location: CytoplasmicMembrane, score: 9.55. | 0.899 |
| KXB61225.1 | PhnD_3 | HMPREF3186_00638 | HMPREF3186_00639 | S4 domain protein; Psort location: Cytoplasmic, score: 7.50. | Phosphate/phosphite/phosphonate ABC transporter, periplasmic binding protein; KEGG: ebe:B21_03937 4.3e-25 phnD; PhnD, subunit of PhnC/PhnD/PhnE alkylphosphonate ABC transporter K02044; Psort location: CytoplasmicMembrane, score: 9.55. | 0.486 |
| KXB61225.1 | ftsZ | HMPREF3186_00638 | HMPREF3186_00783 | S4 domain protein; Psort location: Cytoplasmic, score: 7.50. | Cell division protein FtsZ; Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity. | 0.542 |
| KXB61225.1 | sepF | HMPREF3186_00638 | HMPREF3186_00636 | S4 domain protein; Psort location: Cytoplasmic, score: 7.50. | Putative cell division protein SepF; Cell division protein that is part of the divisome complex and is recruited early to the Z-ring. Probably stimulates Z-ring formation, perhaps through the cross-linking of FtsZ protofilaments. Its function overlaps with FtsA. | 0.869 |
| KXB61961.1 | KXB61224.1 | HMPREF3186_00527 | HMPREF3186_00637 | Hypothetical protein; Psort location: Cytoplasmic, score: 7.50; Belongs to the UPF0358 family. | YGGT family protein; Psort location: CytoplasmicMembrane, score: 9.55. | 0.474 |
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