STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PhnEKEGG: crn:CAR_c20660 3.7e-30 phosphonate ABC transporter permease K02042; Psort location: CytoplasmicMembrane, score: 10.00. (519 aa)    
Predicted Functional Partners:
phnC
Phosphonate ABC transporter, ATP-binding protein; Part of the ABC transporter complex PhnCDE involved in phosphonates import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Phosphonates importer (TC 3.A.1.9.1) family.
 
 0.996
PhnD_4
Phosphate/phosphite/phosphonate ABC transporter, periplasmic binding protein; KEGG: ebe:B21_03937 4.0e-22 phnD; PhnD, subunit of PhnC/PhnD/PhnE alkylphosphonate ABC transporter K02044.
 
 
 0.964
PhnD_3
Phosphate/phosphite/phosphonate ABC transporter, periplasmic binding protein; KEGG: ebe:B21_03937 4.3e-25 phnD; PhnD, subunit of PhnC/PhnD/PhnE alkylphosphonate ABC transporter K02044; Psort location: CytoplasmicMembrane, score: 9.55.
 
 
 0.961
KXB59559.1
Phosphate/phosphite/phosphonate ABC transporter, periplasmic binding protein; KEGG: ebe:B21_03937 3.2e-09 phnD; PhnD, subunit of PhnC/PhnD/PhnE alkylphosphonate ABC transporter K02044.
 
 
 0.959
PhnD_1
Hypothetical protein; KEGG: ebe:B21_03937 0.0016 phnD; PhnD, subunit of PhnC/PhnD/PhnE alkylphosphonate ABC transporter K02044; Psort location: Cytoplasmic, score: 7.50.
 
 
 0.868
rimM
16S rRNA processing protein RimM; An accessory protein needed during the final step in the assembly of 30S ribosomal subunit, possibly for assembly of the head region. Probably interacts with S19. Essential for efficient processing of 16S rRNA. May be needed both before and after RbfA during the maturation of 16S rRNA. It has affinity for free ribosomal 30S subunits but not for 70S ribosomes; Belongs to the RimM family.
       0.668
trmD
tRNA (guanine-N(1)-)-methyltransferase; Specifically methylates guanosine-37 in various tRNAs. Belongs to the RNA methyltransferase TrmD family.
       0.668
RpsA
Putative ribosomal protein S1; KEGG: nth:Nther_1638 3.4e-73 hydroxymethylbutenyl pyrophosphate reductase; K02945 small subunit ribosomal protein S1; K03527 4-hydroxy-3-methylbut-2-enyl diphosphate reductase; Psort location: Cytoplasmic, score: 9.97.
       0.582
KXB61090.1
Putative bacteriocin transport accessory protein; KEGG: sgg:SGGBAA2069_c19780 0.00045 blpT; putative immunity/modification protein; Psort location: Cytoplasmic, score: 7.50.
       0.436
Your Current Organism:
Gemella haemolysans
NCBI taxonomy Id: 1379
Other names: ATCC 10379, CCUG 37985, CIP 101126, G. haemolysans, LMG 18984, LMG:18984, NCTC 12968, Neisseria haemolysans
Server load: medium (42%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.