Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
KXB61129.1 | KXB61130.1 | HMPREF3186_00683 | HMPREF3186_00684 | Hypothetical protein. | DNA-binding helix-turn-helix protein. | 0.537 |
KXB61129.1 | KXB61131.1 | HMPREF3186_00683 | HMPREF3186_00685 | Hypothetical protein. | Hypothetical protein; Psort location: Cytoplasmic, score: 7.50. | 0.537 |
KXB61129.1 | KXB61132.1 | HMPREF3186_00683 | HMPREF3186_00686 | Hypothetical protein. | Hypothetical protein; Psort location: CytoplasmicMembrane, score: 9.55. | 0.537 |
KXB61129.1 | KXB61133.1 | HMPREF3186_00683 | HMPREF3186_00687 | Hypothetical protein. | dUTP diphosphatase; This enzyme is involved in nucleotide metabolism: it produces dUMP, the immediate precursor of thymidine nucleotides and it decreases the intracellular concentration of dUTP so that uracil cannot be incorporated into DNA. | 0.537 |
KXB61129.1 | KXB61134.1 | HMPREF3186_00683 | HMPREF3186_00688 | Hypothetical protein. | Hypothetical protein; Psort location: Cytoplasmic, score: 7.50. | 0.537 |
KXB61129.1 | KXB61135.1 | HMPREF3186_00683 | HMPREF3186_00689 | Hypothetical protein. | Hypothetical protein; Psort location: Cytoplasmic, score: 7.50. | 0.537 |
KXB61129.1 | KXB61136.1 | HMPREF3186_00683 | HMPREF3186_00690 | Hypothetical protein. | Hypothetical protein; KEGG: pfa:PF10_0309 0.0068 DEAD/DEAH box helicase, putative; K11594 ATP-dependent RNA helicase; Psort location: Cytoplasmic, score: 7.50. | 0.411 |
KXB61130.1 | KXB61129.1 | HMPREF3186_00684 | HMPREF3186_00683 | DNA-binding helix-turn-helix protein. | Hypothetical protein. | 0.537 |
KXB61130.1 | KXB61131.1 | HMPREF3186_00684 | HMPREF3186_00685 | DNA-binding helix-turn-helix protein. | Hypothetical protein; Psort location: Cytoplasmic, score: 7.50. | 0.773 |
KXB61130.1 | KXB61132.1 | HMPREF3186_00684 | HMPREF3186_00686 | DNA-binding helix-turn-helix protein. | Hypothetical protein; Psort location: CytoplasmicMembrane, score: 9.55. | 0.773 |
KXB61130.1 | KXB61133.1 | HMPREF3186_00684 | HMPREF3186_00687 | DNA-binding helix-turn-helix protein. | dUTP diphosphatase; This enzyme is involved in nucleotide metabolism: it produces dUMP, the immediate precursor of thymidine nucleotides and it decreases the intracellular concentration of dUTP so that uracil cannot be incorporated into DNA. | 0.773 |
KXB61130.1 | KXB61134.1 | HMPREF3186_00684 | HMPREF3186_00688 | DNA-binding helix-turn-helix protein. | Hypothetical protein; Psort location: Cytoplasmic, score: 7.50. | 0.773 |
KXB61130.1 | KXB61135.1 | HMPREF3186_00684 | HMPREF3186_00689 | DNA-binding helix-turn-helix protein. | Hypothetical protein; Psort location: Cytoplasmic, score: 7.50. | 0.773 |
KXB61130.1 | KXB61136.1 | HMPREF3186_00684 | HMPREF3186_00690 | DNA-binding helix-turn-helix protein. | Hypothetical protein; KEGG: pfa:PF10_0309 0.0068 DEAD/DEAH box helicase, putative; K11594 ATP-dependent RNA helicase; Psort location: Cytoplasmic, score: 7.50. | 0.574 |
KXB61130.1 | KXB61137.1 | HMPREF3186_00684 | HMPREF3186_00691 | DNA-binding helix-turn-helix protein. | Site-specific recombinase, phage integrase family; KEGG: apb:SAR116_1016 4.0e-06 phage integrase; Psort location: Cytoplasmic, score: 7.50. | 0.511 |
KXB61131.1 | KXB61129.1 | HMPREF3186_00685 | HMPREF3186_00683 | Hypothetical protein; Psort location: Cytoplasmic, score: 7.50. | Hypothetical protein. | 0.537 |
KXB61131.1 | KXB61130.1 | HMPREF3186_00685 | HMPREF3186_00684 | Hypothetical protein; Psort location: Cytoplasmic, score: 7.50. | DNA-binding helix-turn-helix protein. | 0.773 |
KXB61131.1 | KXB61132.1 | HMPREF3186_00685 | HMPREF3186_00686 | Hypothetical protein; Psort location: Cytoplasmic, score: 7.50. | Hypothetical protein; Psort location: CytoplasmicMembrane, score: 9.55. | 0.773 |
KXB61131.1 | KXB61133.1 | HMPREF3186_00685 | HMPREF3186_00687 | Hypothetical protein; Psort location: Cytoplasmic, score: 7.50. | dUTP diphosphatase; This enzyme is involved in nucleotide metabolism: it produces dUMP, the immediate precursor of thymidine nucleotides and it decreases the intracellular concentration of dUTP so that uracil cannot be incorporated into DNA. | 0.773 |
KXB61131.1 | KXB61134.1 | HMPREF3186_00685 | HMPREF3186_00688 | Hypothetical protein; Psort location: Cytoplasmic, score: 7.50. | Hypothetical protein; Psort location: Cytoplasmic, score: 7.50. | 0.773 |
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