STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXB60548.1Transposase; KEGG: efc:EFAU004_01884 9.2e-13 IS1476, transposase; Psort location: Cytoplasmic, score: 7.50. (381 aa)    
Predicted Functional Partners:
KXB64048.1
Hypothetical protein.
 
      0.899
merA
mercury(II) reductase; Resistance to Hg(2+) in bacteria appears to be governed by a specialized system which includes mercuric reductase. MerA protein is responsible for volatilizing mercury as Hg(0). Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family.
 
     0.808
MerR1
KEGG: eci:UTI89_C3737 3.0e-17 zntR; zinc-responsive transcriptional regulator K13638; Psort location: Cytoplasmic, score: 7.50.
 
     0.680
KXB60698.1
Hypothetical protein; KEGG: efc:EFAU004_02480 1.0e-09 IS1251-like transposase; Psort location: CytoplasmicMembrane, score: 9.55.
  
     0.678
KXB59038.1
Hypothetical protein; KEGG: efc:EFAU004_01884 2.4e-16 IS1476, transposase.
  
     0.672
Your Current Organism:
Gemella haemolysans
NCBI taxonomy Id: 1379
Other names: ATCC 10379, CCUG 37985, CIP 101126, G. haemolysans, LMG 18984, LMG:18984, NCTC 12968, Neisseria haemolysans
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