STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NorMKEGG: rcp:RCAP_rcc02680 1.8e-35 mdtK; multidrug resistance protein MdtK K03327; Psort location: CytoplasmicMembrane, score: 10.00. (453 aa)    
Predicted Functional Partners:
KXB60254.1
Hypothetical protein.
     
 0.503
Gap
Glyceraldehyde-3-phosphate dehydrogenase, type I; KEGG: efa:EF1964 7.0e-144 gap-2; glyceraldehyde-3-phosphate dehydrogenase; K00134 glyceraldehyde 3-phosphate dehydrogenase; Psort location: Cytoplasmic, score: 9.97.
  
  
 0.486
RpsA
Putative ribosomal protein S1; KEGG: nth:Nther_1638 3.4e-73 hydroxymethylbutenyl pyrophosphate reductase; K02945 small subunit ribosomal protein S1; K03527 4-hydroxy-3-methylbut-2-enyl diphosphate reductase; Psort location: Cytoplasmic, score: 9.97.
  
    0.479
KXB60255.1
EDD domain protein, DegV family; KEGG: mgf:MGF_3873 1.0e-07 DegV-like protein.
       0.470
cinA
Competence/damage-inducible protein CinA domain protein; KEGG: cco:CCC13826_0279 4.5e-15 fadD; long-chain-fatty-acid--CoA ligase K03743; Psort location: CytoplasmicMembrane, score: 8.16; Belongs to the CinA family.
 
   
 0.460
MepA_2
MATE efflux family protein; KEGG: ssr:SALIVB_2015 3.8e-15 queuine tRNA-ribosyltransferase; Psort location: CytoplasmicMembrane, score: 10.00.
 
   
 0.453
Your Current Organism:
Gemella haemolysans
NCBI taxonomy Id: 1379
Other names: ATCC 10379, CCUG 37985, CIP 101126, G. haemolysans, LMG 18984, LMG:18984, NCTC 12968, Neisseria haemolysans
Server load: low (30%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.