Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| KXB59638.1 | KXB60259.1 | HMPREF3186_01033 | HMPREF3186_00843 | Hypothetical protein; KEGG: sub:SUB0007 0.0014 trcF; transcription-repair coupling factor; K03723 transcription-repair coupling factor (superfamily II helicase); Psort location: Cytoplasmic, score: 7.50. | Site-specific recombinase, phage integrase family; KEGG: bqy:MUS_1239 6.4e-31 ATP synthase C chain (lipid-binding protein)(dicyclohexylcarbodiimide-binding protein); Belongs to the 'phage' integrase family. | 0.464 |
| KXB60259.1 | KXB59638.1 | HMPREF3186_00843 | HMPREF3186_01033 | Site-specific recombinase, phage integrase family; KEGG: bqy:MUS_1239 6.4e-31 ATP synthase C chain (lipid-binding protein)(dicyclohexylcarbodiimide-binding protein); Belongs to the 'phage' integrase family. | Hypothetical protein; KEGG: sub:SUB0007 0.0014 trcF; transcription-repair coupling factor; K03723 transcription-repair coupling factor (superfamily II helicase); Psort location: Cytoplasmic, score: 7.50. | 0.464 |
| KXB60259.1 | KXB60265.1 | HMPREF3186_00843 | HMPREF3186_00849 | Site-specific recombinase, phage integrase family; KEGG: bqy:MUS_1239 6.4e-31 ATP synthase C chain (lipid-binding protein)(dicyclohexylcarbodiimide-binding protein); Belongs to the 'phage' integrase family. | Phage/plasmid primase, P4 family domain protein; KEGG: llm:llmg_2252 5.0e-69 ps517; putative DNA primase K06919. | 0.549 |
| KXB60259.1 | RecJ | HMPREF3186_00843 | HMPREF3186_01206 | Site-specific recombinase, phage integrase family; KEGG: bqy:MUS_1239 6.4e-31 ATP synthase C chain (lipid-binding protein)(dicyclohexylcarbodiimide-binding protein); Belongs to the 'phage' integrase family. | single-stranded-DNA-specific exonuclease RecJ; KEGG: sha:SH1285 1.8e-131 hypothetical protein; K07462 single-stranded-DNA-specific exonuclease; Psort location: Cytoplasmic, score: 7.50. | 0.409 |
| KXB60259.1 | polA | HMPREF3186_00843 | HMPREF3186_00816 | Site-specific recombinase, phage integrase family; KEGG: bqy:MUS_1239 6.4e-31 ATP synthase C chain (lipid-binding protein)(dicyclohexylcarbodiimide-binding protein); Belongs to the 'phage' integrase family. | DNA-directed DNA polymerase; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity. | 0.400 |
| KXB60265.1 | KXB60259.1 | HMPREF3186_00849 | HMPREF3186_00843 | Phage/plasmid primase, P4 family domain protein; KEGG: llm:llmg_2252 5.0e-69 ps517; putative DNA primase K06919. | Site-specific recombinase, phage integrase family; KEGG: bqy:MUS_1239 6.4e-31 ATP synthase C chain (lipid-binding protein)(dicyclohexylcarbodiimide-binding protein); Belongs to the 'phage' integrase family. | 0.549 |
| KXB60265.1 | polA | HMPREF3186_00849 | HMPREF3186_00816 | Phage/plasmid primase, P4 family domain protein; KEGG: llm:llmg_2252 5.0e-69 ps517; putative DNA primase K06919. | DNA-directed DNA polymerase; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity. | 0.583 |
| RecJ | KXB60259.1 | HMPREF3186_01206 | HMPREF3186_00843 | single-stranded-DNA-specific exonuclease RecJ; KEGG: sha:SH1285 1.8e-131 hypothetical protein; K07462 single-stranded-DNA-specific exonuclease; Psort location: Cytoplasmic, score: 7.50. | Site-specific recombinase, phage integrase family; KEGG: bqy:MUS_1239 6.4e-31 ATP synthase C chain (lipid-binding protein)(dicyclohexylcarbodiimide-binding protein); Belongs to the 'phage' integrase family. | 0.409 |
| RecJ | polA | HMPREF3186_01206 | HMPREF3186_00816 | single-stranded-DNA-specific exonuclease RecJ; KEGG: sha:SH1285 1.8e-131 hypothetical protein; K07462 single-stranded-DNA-specific exonuclease; Psort location: Cytoplasmic, score: 7.50. | DNA-directed DNA polymerase; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity. | 0.648 |
| polA | KXB60259.1 | HMPREF3186_00816 | HMPREF3186_00843 | DNA-directed DNA polymerase; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity. | Site-specific recombinase, phage integrase family; KEGG: bqy:MUS_1239 6.4e-31 ATP synthase C chain (lipid-binding protein)(dicyclohexylcarbodiimide-binding protein); Belongs to the 'phage' integrase family. | 0.400 |
| polA | KXB60265.1 | HMPREF3186_00816 | HMPREF3186_00849 | DNA-directed DNA polymerase; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity. | Phage/plasmid primase, P4 family domain protein; KEGG: llm:llmg_2252 5.0e-69 ps517; putative DNA primase K06919. | 0.583 |
| polA | RecJ | HMPREF3186_00816 | HMPREF3186_01206 | DNA-directed DNA polymerase; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity. | single-stranded-DNA-specific exonuclease RecJ; KEGG: sha:SH1285 1.8e-131 hypothetical protein; K07462 single-stranded-DNA-specific exonuclease; Psort location: Cytoplasmic, score: 7.50. | 0.648 |