Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| FruA | KXB60283.1 | HMPREF3186_00763 | HMPREF3186_00869 | KEGG: aur:HMPREF9243_1309 1.3e-181 fruA_2; PTS system fructose-specific transporter subunit IIABC; K02768 PTS system, fructose-specific IIA component; K02769 PTS system, fructose-specific IIB component K02770; Psort location: CytoplasmicMembrane, score: 10.00. | Hypothetical protein; Psort location: Cytoplasmic, score: 7.50. | 0.492 |
| FruA | sigA | HMPREF3186_00763 | HMPREF3186_00495 | KEGG: aur:HMPREF9243_1309 1.3e-181 fruA_2; PTS system fructose-specific transporter subunit IIABC; K02768 PTS system, fructose-specific IIA component; K02769 PTS system, fructose-specific IIB component K02770; Psort location: CytoplasmicMembrane, score: 10.00. | RNA polymerase sigma factor RpoD; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth. | 0.497 |
| KXB57893.1 | KXB60283.1 | HMPREF3186_01538 | HMPREF3186_00869 | CsbD-like protein; KEGG: ssr:SALIVB_0754 1.6e-11 putative manganese-dependent inorganic pyrophosphatase; Belongs to the UPF0337 (CsbD) family. | Hypothetical protein; Psort location: Cytoplasmic, score: 7.50. | 0.508 |
| KXB60283.1 | FruA | HMPREF3186_00869 | HMPREF3186_00763 | Hypothetical protein; Psort location: Cytoplasmic, score: 7.50. | KEGG: aur:HMPREF9243_1309 1.3e-181 fruA_2; PTS system fructose-specific transporter subunit IIABC; K02768 PTS system, fructose-specific IIA component; K02769 PTS system, fructose-specific IIB component K02770; Psort location: CytoplasmicMembrane, score: 10.00. | 0.492 |
| KXB60283.1 | KXB57893.1 | HMPREF3186_00869 | HMPREF3186_01538 | Hypothetical protein; Psort location: Cytoplasmic, score: 7.50. | CsbD-like protein; KEGG: ssr:SALIVB_0754 1.6e-11 putative manganese-dependent inorganic pyrophosphatase; Belongs to the UPF0337 (CsbD) family. | 0.508 |
| KXB60283.1 | KXB60284.1 | HMPREF3186_00869 | HMPREF3186_00870 | Hypothetical protein; Psort location: Cytoplasmic, score: 7.50. | KEGG: bmd:BMD_1719 1.4e-51 methyltransferase domain-containing protein; Psort location: Cytoplasmic, score: 7.50. | 0.654 |
| KXB60283.1 | KXB60991.1 | HMPREF3186_00869 | HMPREF3186_00751 | Hypothetical protein; Psort location: Cytoplasmic, score: 7.50. | Hypothetical protein; KEGG: fnu:FN1132 0.00014 nicotinamide-nucleotide adenylyltransferase K00969. | 0.405 |
| KXB60283.1 | KXB63148.1 | HMPREF3186_00869 | HMPREF3186_00179 | Hypothetical protein; Psort location: Cytoplasmic, score: 7.50. | Hypothetical protein; KEGG: scp:HMPREF0833_10349 1.1e-81 thiD; phosphomethylpyrimidine kinase. | 0.509 |
| KXB60283.1 | YetF | HMPREF3186_00869 | HMPREF3186_00030 | Hypothetical protein; Psort location: Cytoplasmic, score: 7.50. | Hypothetical protein; Psort location: CytoplasmicMembrane, score: 9.55. | 0.479 |
| KXB60283.1 | rpoA | HMPREF3186_00869 | HMPREF3186_01796 | Hypothetical protein; Psort location: Cytoplasmic, score: 7.50. | DNA-directed RNA polymerase, alpha subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.562 |
| KXB60283.1 | sigA | HMPREF3186_00869 | HMPREF3186_00495 | Hypothetical protein; Psort location: Cytoplasmic, score: 7.50. | RNA polymerase sigma factor RpoD; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth. | 0.400 |
| KXB60284.1 | KXB60283.1 | HMPREF3186_00870 | HMPREF3186_00869 | KEGG: bmd:BMD_1719 1.4e-51 methyltransferase domain-containing protein; Psort location: Cytoplasmic, score: 7.50. | Hypothetical protein; Psort location: Cytoplasmic, score: 7.50. | 0.654 |
| KXB60991.1 | KXB60283.1 | HMPREF3186_00751 | HMPREF3186_00869 | Hypothetical protein; KEGG: fnu:FN1132 0.00014 nicotinamide-nucleotide adenylyltransferase K00969. | Hypothetical protein; Psort location: Cytoplasmic, score: 7.50. | 0.405 |
| KXB63148.1 | KXB60283.1 | HMPREF3186_00179 | HMPREF3186_00869 | Hypothetical protein; KEGG: scp:HMPREF0833_10349 1.1e-81 thiD; phosphomethylpyrimidine kinase. | Hypothetical protein; Psort location: Cytoplasmic, score: 7.50. | 0.509 |
| YetF | KXB60283.1 | HMPREF3186_00030 | HMPREF3186_00869 | Hypothetical protein; Psort location: CytoplasmicMembrane, score: 9.55. | Hypothetical protein; Psort location: Cytoplasmic, score: 7.50. | 0.479 |
| rpoA | KXB60283.1 | HMPREF3186_01796 | HMPREF3186_00869 | DNA-directed RNA polymerase, alpha subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | Hypothetical protein; Psort location: Cytoplasmic, score: 7.50. | 0.562 |
| rpoA | sigA | HMPREF3186_01796 | HMPREF3186_00495 | DNA-directed RNA polymerase, alpha subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | RNA polymerase sigma factor RpoD; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth. | 0.900 |
| sigA | FruA | HMPREF3186_00495 | HMPREF3186_00763 | RNA polymerase sigma factor RpoD; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth. | KEGG: aur:HMPREF9243_1309 1.3e-181 fruA_2; PTS system fructose-specific transporter subunit IIABC; K02768 PTS system, fructose-specific IIA component; K02769 PTS system, fructose-specific IIB component K02770; Psort location: CytoplasmicMembrane, score: 10.00. | 0.497 |
| sigA | KXB60283.1 | HMPREF3186_00495 | HMPREF3186_00869 | RNA polymerase sigma factor RpoD; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth. | Hypothetical protein; Psort location: Cytoplasmic, score: 7.50. | 0.400 |
| sigA | rpoA | HMPREF3186_00495 | HMPREF3186_01796 | RNA polymerase sigma factor RpoD; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth. | DNA-directed RNA polymerase, alpha subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.900 |