STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXB60102.1Transcriptional regulator, ArsR family. (144 aa)    
Predicted Functional Partners:
KXB60101.1
Transporter, major facilitator family protein; KEGG: cco:CCC13826_1522 7.2e-14 methionyl-tRNA formyltransferase; Psort location: CytoplasmicMembrane, score: 10.00.
 
  
 0.855
KXB60103.1
Membrane protein insertase, YidC/Oxa1 family; Psort location: CytoplasmicMembrane, score: 10.00.
       0.491
KXB63623.1
Sortase family protein; KEGG: mcl:MCCL_0812 2.1e-34 hypothetical protein; K07284 sortase A.
 
   
 0.445
KXB59102.1
MutT/NUDIX family protein; Psort location: Cytoplasmic, score: 7.50.
  
     0.414
Your Current Organism:
Gemella haemolysans
NCBI taxonomy Id: 1379
Other names: ATCC 10379, CCUG 37985, CIP 101126, G. haemolysans, LMG 18984, LMG:18984, NCTC 12968, Neisseria haemolysans
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