STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXB60109.1Hypothetical protein; Psort location: Cytoplasmic, score: 7.50. (87 aa)    
Predicted Functional Partners:
pnp
Polyribonucleotide nucleotidyltransferase; Involved in mRNA degradation. Catalyzes the phosphorolysis of single-stranded polyribonucleotides processively in the 3'- to 5'- direction.
       0.763
RsmD
RNA methyltransferase, RsmD family; KEGG: sud:ST398NM01_1120 2.1e-39 Methyltransferase; Psort location: Cytoplasmic, score: 7.50.
  
  
 0.717
PanF
Sodium/pantothenate symporter; KEGG: hip:CGSHiEE_04285 2.9e-28 cytidine deaminase K11928; Psort location: CytoplasmicMembrane, score: 10.00; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family.
 
     0.582
coaD
Pantetheine-phosphate adenylyltransferase; Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate. Belongs to the bacterial CoaD family.
       0.574
KXB60116.1
Hypothetical protein.
 
     0.555
murG
Undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase; Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II); Belongs to the glycosyltransferase 28 family. MurG subfamily.
  
    0.545
KXB60113.1
PAP2 family protein; KEGG: snc:HMPREF0837_10786 7.6e-12 phosphatidic acid phosphatase; Psort location: CytoplasmicMembrane, score: 10.00.
       0.528
KXB60114.1
Hypothetical protein; Psort location: CytoplasmicMembrane, score: 10.00.
       0.528
KXB60117.1
LysM domain protein; KEGG: fin:KQS_00120 4.2e-06 membrane-bound lytic murein transglycosylase precursor; K08307 membrane-bound lytic murein transglycosylase D; Psort location: CytoplasmicMembrane, score: 8.28.
       0.422
KXB60107.1
Na/Pi-cotransporter II-like protein; KEGG: stj:SALIVA_0487 2.3e-152 pgk; phosphoglycerate kinase; Psort location: CytoplasmicMembrane, score: 10.00.
       0.421
Your Current Organism:
Gemella haemolysans
NCBI taxonomy Id: 1379
Other names: ATCC 10379, CCUG 37985, CIP 101126, G. haemolysans, LMG 18984, LMG:18984, NCTC 12968, Neisseria haemolysans
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