STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AddAPutative ATP-dependent nuclease subunit A; ATP-dependent DNA helicase. (1231 aa)    
Predicted Functional Partners:
KXB61388.1
Hypothetical protein; ATP-dependent DNA helicase.
 
 
 0.985
recD2
Helicase, RecD/TraA family; DNA-dependent ATPase and ATP-dependent 5'-3' DNA helicase. Has no activity on blunt DNA or DNA with 3'-overhangs, requires at least 10 bases of 5'-ssDNA for helicase activity; Belongs to the RecD family. RecD-like subfamily.
  
 
 0.766
KXB59790.1
KEGG: sha:SH1920 2.7e-27 hypothetical protein; K02552 menaquinone-specific isochorismate synthase; Psort location: Cytoplasmic, score: 7.50.
  
  
 0.700
TrmK
KEGG: lsl:LSL_0846 2.8e-53 hypothetical protein; K06967 tRNA (adenine22-N1)-methyltransferase; Psort location: Cytoplasmic, score: 7.50.
 
     0.692
polA
DNA-directed DNA polymerase; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity.
 
   
 0.688
KXB59789.1
KEGG: bcy:Bcer98_2753 5.7e-12 nagB; glucosamine-6-phosphate deaminase; K02564 glucosamine-6-phosphate deaminase; Psort location: Cytoplasmic, score: 7.50.
     
 0.655
YicL
Putative membrane protein; KEGG: cco:CCC13826_1128 1.4e-44 phosphate acetyltransferase (phosphotransacetylase); Psort location: CytoplasmicMembrane, score: 10.00.
  
    0.645
KXB62236.1
Polysaccharide biosynthesis protein; KEGG: ssr:SALIVB_0347 4.0e-54 cystathionine gamma-synthase; Psort location: CytoplasmicMembrane, score: 10.00.
 
     0.629
PurL
KEGG: ipo:Ilyop_2204 0. phosphoribosylformylglycinamidine synthase K01952; Psort location: Cytoplasmic, score: 9.97.
 
   
 0.592
KXB59787.1
Ser/Thr phosphatase family protein; KEGG: bce:BC2476 6.0e-51 phosphoesterase K01175.
       0.557
Your Current Organism:
Gemella haemolysans
NCBI taxonomy Id: 1379
Other names: ATCC 10379, CCUG 37985, CIP 101126, G. haemolysans, LMG 18984, LMG:18984, NCTC 12968, Neisseria haemolysans
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