STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXB59806.1methionine-R-sulfoxide reductase; KEGG: faa:HMPREF0389_00920 3.8e-49 methionine-S-sulfoxide reductase/methionine-R-sulfoxide reductase; K12267 peptide methionine sulfoxide reductase msrA/msrB; Psort location: Cytoplasmic, score: 7.50. (156 aa)    
Predicted Functional Partners:
msrA
Peptide-methionine (S)-S-oxide reductase; Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine.
 
 0.990
DipZ
Cytochrome C biogenesis protein transmembrane region; KEGG: oih:OB1677 3.7e-35 ccdA; holocytochrome c synthase K06196; Psort location: CytoplasmicMembrane, score: 10.00.
 
  
 0.773
KXB59805.1
Phospholipase, patatin family; KEGG: fnu:FN0508 3.7e-83 serine protease.
       0.773
KXB63149.1
Hypothetical protein; KEGG: sis:LS215_0050 3.2e-06 thioredoxin K03671; Psort location: Cytoplasmic, score: 7.50.
   
 0.651
KXB59804.1
NAD dependent epimerase/dehydratase family protein; KEGG: llm:llmg_2003 3.0e-17 UDP-glucose 4-epimerase K01784.
  
    0.560
rplT
Ribosomal protein L20; Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit.
   
 
 0.559
KXB62705.1
Dihydrolipoyl dehydrogenase; KEGG: sgo:SGO_1130 6.0e-186 dihydrolipoamide dehydrogenase K00382; Psort location: Cytoplasmic, score: 9.97.
  
 
 0.509
polA
DNA-directed DNA polymerase; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity.
  
  
 0.509
rplK
Ribosomal protein L11; Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors.
   
 
 0.485
rpsI
Ribosomal protein S9; KEGG: apb:SAR116_0492 1.9e-24 30S ribosomal protein S9 K02996; Psort location: Cytoplasmic, score: 9.67; Belongs to the universal ribosomal protein uS9 family.
   
   0.485
Your Current Organism:
Gemella haemolysans
NCBI taxonomy Id: 1379
Other names: ATCC 10379, CCUG 37985, CIP 101126, G. haemolysans, LMG 18984, LMG:18984, NCTC 12968, Neisseria haemolysans
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