Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| Cls | KXB59811.1 | HMPREF3186_00947 | HMPREF3186_00948 | Phage tail component protein; Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol. | Hypothetical protein; Psort location: Cytoplasmic, score: 7.50. | 0.460 |
| Cls | RlmCD | HMPREF3186_00947 | HMPREF3186_00949 | Phage tail component protein; Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol. | 23S rRNA (uracil-5-)-methyltransferase RumA; KEGG: gth:Geoth_3441 6.9e-98 TrmA family RNA methyltransferase; K00557 tRNA (uracil-5-)-methyltransferase; Psort location: Cytoplasmic, score: 7.50; Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family. | 0.407 |
| KXB59811.1 | Cls | HMPREF3186_00948 | HMPREF3186_00947 | Hypothetical protein; Psort location: Cytoplasmic, score: 7.50. | Phage tail component protein; Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol. | 0.460 |
| KXB59811.1 | KXB59813.1 | HMPREF3186_00948 | HMPREF3186_00950 | Hypothetical protein; Psort location: Cytoplasmic, score: 7.50. | uracil-DNA glycosylase family protein; KEGG: scp:HMPREF0833_10668 1.5e-63 ung2; uracil DNA glycosylase; Psort location: Cytoplasmic, score: 7.50. | 0.558 |
| KXB59811.1 | RlmCD | HMPREF3186_00948 | HMPREF3186_00949 | Hypothetical protein; Psort location: Cytoplasmic, score: 7.50. | 23S rRNA (uracil-5-)-methyltransferase RumA; KEGG: gth:Geoth_3441 6.9e-98 TrmA family RNA methyltransferase; K00557 tRNA (uracil-5-)-methyltransferase; Psort location: Cytoplasmic, score: 7.50; Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family. | 0.598 |
| KXB59813.1 | KXB59811.1 | HMPREF3186_00950 | HMPREF3186_00948 | uracil-DNA glycosylase family protein; KEGG: scp:HMPREF0833_10668 1.5e-63 ung2; uracil DNA glycosylase; Psort location: Cytoplasmic, score: 7.50. | Hypothetical protein; Psort location: Cytoplasmic, score: 7.50. | 0.558 |
| KXB59813.1 | RlmCD | HMPREF3186_00950 | HMPREF3186_00949 | uracil-DNA glycosylase family protein; KEGG: scp:HMPREF0833_10668 1.5e-63 ung2; uracil DNA glycosylase; Psort location: Cytoplasmic, score: 7.50. | 23S rRNA (uracil-5-)-methyltransferase RumA; KEGG: gth:Geoth_3441 6.9e-98 TrmA family RNA methyltransferase; K00557 tRNA (uracil-5-)-methyltransferase; Psort location: Cytoplasmic, score: 7.50; Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family. | 0.734 |
| RlmCD | Cls | HMPREF3186_00949 | HMPREF3186_00947 | 23S rRNA (uracil-5-)-methyltransferase RumA; KEGG: gth:Geoth_3441 6.9e-98 TrmA family RNA methyltransferase; K00557 tRNA (uracil-5-)-methyltransferase; Psort location: Cytoplasmic, score: 7.50; Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family. | Phage tail component protein; Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol. | 0.407 |
| RlmCD | KXB59811.1 | HMPREF3186_00949 | HMPREF3186_00948 | 23S rRNA (uracil-5-)-methyltransferase RumA; KEGG: gth:Geoth_3441 6.9e-98 TrmA family RNA methyltransferase; K00557 tRNA (uracil-5-)-methyltransferase; Psort location: Cytoplasmic, score: 7.50; Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family. | Hypothetical protein; Psort location: Cytoplasmic, score: 7.50. | 0.598 |
| RlmCD | KXB59813.1 | HMPREF3186_00949 | HMPREF3186_00950 | 23S rRNA (uracil-5-)-methyltransferase RumA; KEGG: gth:Geoth_3441 6.9e-98 TrmA family RNA methyltransferase; K00557 tRNA (uracil-5-)-methyltransferase; Psort location: Cytoplasmic, score: 7.50; Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family. | uracil-DNA glycosylase family protein; KEGG: scp:HMPREF0833_10668 1.5e-63 ung2; uracil DNA glycosylase; Psort location: Cytoplasmic, score: 7.50. | 0.734 |