STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXB59709.1Transcriptional regulator, MarR family; Psort location: Cytoplasmic, score: 7.50. (126 aa)    
Predicted Functional Partners:
HchA
Protein in dcm-seru intergenic region; KEGG: reh:H16_B1347 1.4e-74 chaperone protein HchA K05523; Psort location: Cytoplasmic, score: 9.67.
       0.539
KXB59707.1
Hypothetical protein; KEGG: aoe:Clos_0775 3.5e-12 uvsE; putative UV damage endonuclease; K13281 UV DNA damage endonuclease.
       0.538
KXB59708.1
Hypothetical protein; KEGG: sap:Sulac_2935 7.4e-30 DNA-(apurinic or apyrimidinic site) lyase, Pyrimidine dimer DNA glycosylase.
       0.538
LimB_2
Luciferase family oxidoreductase, FMN-dependent, PP_0088 family; KEGG: mct:MCR_1720 1.9e-86 luciferase-like monooxygenase; Psort location: Cytoplasmic, score: 7.50.
       0.526
OpuCC
ABC transporter, substrate-binding protein, QAT family; KEGG: stj:SALIVA_1161 3.5e-165 glycine betaine/L-proline ABC transporter,permease/glycine betaine/L-proline-binding protein; Psort location: CytoplasmicMembrane, score: 10.00.
  
  
 0.485
KXB58768.1
ABC transporter, ATP-binding protein; KEGG: ppo:PPM_0762 6.8e-59 drrA1; spermidine/putrescine import ATP-binding protein potA; Psort location: CytoplasmicMembrane, score: 9.51.
 
    0.424
KXB58766.1
Hypothetical protein; Psort location: CytoplasmicMembrane, score: 10.00.
 
     0.412
Your Current Organism:
Gemella haemolysans
NCBI taxonomy Id: 1379
Other names: ATCC 10379, CCUG 37985, CIP 101126, G. haemolysans, LMG 18984, LMG:18984, NCTC 12968, Neisseria haemolysans
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