STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXB59637.1KEGG: bmq:BMQ_5117 3.3e-66 comFA; ComFA competence protein K02240; Psort location: Cytoplasmic, score: 9.97. (512 aa)    
Predicted Functional Partners:
KXB59638.1
Hypothetical protein; KEGG: sub:SUB0007 0.0014 trcF; transcription-repair coupling factor; K03723 transcription-repair coupling factor (superfamily II helicase); Psort location: Cytoplasmic, score: 7.50.
  
  
 0.916
KXB58264.1
ComG operon protein 1 family protein; KEGG: cco:CCC13826_1231 1.2e-45 L(+)-tartrate dehydratase subunit beta (L-TTD beta) K02454; Psort location: Cytoplasmic, score: 9.89.
   
  
 0.763
KXB58266.1
Putative ComG operon protein 3; Required for transformation and DNA binding.
 
  
 0.692
KXB63640.1
comEA protein; KEGG: has:Halsa_0780 4.0e-11 glycogen/starch synthase K00703; Psort location: CytoplasmicMembrane, score: 10.00.
   
  
 0.669
KXB58265.1
Bacterial type II secretion system protein F domain protein; KEGG: pfe:PSF113_5005 1.5e-11 pilC; protein PilC K02653; Psort location: CytoplasmicMembrane, score: 10.00.
   
  
 0.600
KXB58268.1
Prepilin-type cleavage/methylation protein.
  
  
 0.526
KXB59639.1
Transporter, major facilitator family protein; Psort location: CytoplasmicMembrane, score: 10.00.
       0.498
hpf
Ribosomal subunit interface protein; Required for dimerization of active 70S ribosomes into 100S ribosomes in stationary phase; 100S ribosomes are translationally inactive and sometimes present during exponential growth.
       0.468
KXB57223.1
DNA protecting protein DprA; KEGG: ccm:Ccan_01460 5.8e-30 protein smf K04096; Psort location: Cytoplasmic, score: 7.50.
   
  
 0.463
OutO
Bacterial peptidase A24 protein; KEGG: sca:Sca_1265 1.8e-28 hypothetical protein; K02236 leader peptidase (prepilin peptidase) / N-methyltransferase; Psort location: CytoplasmicMembrane, score: 10.00.
   
  
 0.453
Your Current Organism:
Gemella haemolysans
NCBI taxonomy Id: 1379
Other names: ATCC 10379, CCUG 37985, CIP 101126, G. haemolysans, LMG 18984, LMG:18984, NCTC 12968, Neisseria haemolysans
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.