STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXB59638.1Hypothetical protein; KEGG: sub:SUB0007 0.0014 trcF; transcription-repair coupling factor; K03723 transcription-repair coupling factor (superfamily II helicase); Psort location: Cytoplasmic, score: 7.50. (198 aa)    
Predicted Functional Partners:
KXB59637.1
KEGG: bmq:BMQ_5117 3.3e-66 comFA; ComFA competence protein K02240; Psort location: Cytoplasmic, score: 9.97.
  
  
 0.916
KXB57223.1
DNA protecting protein DprA; KEGG: ccm:Ccan_01460 5.8e-30 protein smf K04096; Psort location: Cytoplasmic, score: 7.50.
  
 
 0.714
HemY
Protoporphyrinogen oxidase; KEGG: btc:CT43_CH1023 1.0e-32 hemY1; protoporphyrinogen oxidase; K00231 oxygen-dependent protoporphyrinogen oxidase; Psort location: Cytoplasmic, score: 9.89.
 
    0.608
NagA
KEGG: csh:Closa_0363 6.2e-113 N-acetylglucosamine-6-phosphate deacetylase K01443; Psort location: Cytoplasmic, score: 7.50.
  
    0.575
KXB58779.1
KEGG: apb:SAR116_0666 2.1e-18 DNA repair protein RadC K03630; Psort location: Cytoplasmic, score: 7.50; Belongs to the UPF0758 family.
  
    0.574
KXB63642.1
Putative DNA internalization competence protein ComEC/Rec2-like protein; KEGG: apb:SAR116_0501 1.7e-15 DNA uptake protein ComEC K02238; Psort location: CytoplasmicMembrane, score: 10.00.
  
  
 0.554
KXB63640.1
comEA protein; KEGG: has:Halsa_0780 4.0e-11 glycogen/starch synthase K00703; Psort location: CytoplasmicMembrane, score: 10.00.
  
  
 0.525
KXB59639.1
Transporter, major facilitator family protein; Psort location: CytoplasmicMembrane, score: 10.00.
  
    0.506
hpf
Ribosomal subunit interface protein; Required for dimerization of active 70S ribosomes into 100S ribosomes in stationary phase; 100S ribosomes are translationally inactive and sometimes present during exponential growth.
  
    0.490
KXB58264.1
ComG operon protein 1 family protein; KEGG: cco:CCC13826_1231 1.2e-45 L(+)-tartrate dehydratase subunit beta (L-TTD beta) K02454; Psort location: Cytoplasmic, score: 9.89.
  
  
 0.487
Your Current Organism:
Gemella haemolysans
NCBI taxonomy Id: 1379
Other names: ATCC 10379, CCUG 37985, CIP 101126, G. haemolysans, LMG 18984, LMG:18984, NCTC 12968, Neisseria haemolysans
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