STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXB59647.1RDD family protein; Psort location: CytoplasmicMembrane, score: 9.55. (217 aa)    
Predicted Functional Partners:
KXB59646.1
Signal peptide peptidase SppA; KEGG: mcl:MCCL_1382 1.0e-48 hypothetical protein; K04773 protease IV; Psort location: CytoplasmicMembrane, score: 9.51.
 
  
 0.944
KXB59645.1
Hypothetical protein.
       0.510
DnaC
Replicative DNA helicase; Participates in initiation and elongation during chromosome replication; it exhibits DNA-dependent ATPase activity. Belongs to the helicase family. DnaB subfamily.
       0.506
KXB57811.1
S4 domain protein; KEGG: fpl:Ferp_1588 2.9e-06 RNA-binding S4 domain protein; K06442 23S rRNA (cytidine1920-2'-O)/16S rRNA (cytidine1409-2'-O)-methyltransferase; Psort location: Cytoplasmic, score: 7.50.
  
    0.479
rplI
Ribosomal protein L9; Binds to the 23S rRNA.
       0.470
KXB62849.1
KEGG: lsp:Bsph_4142 2.3e-42 hypothetical protein; K00571 site-specific DNA-methyltransferase (adenine-specific).
 
     0.455
EzrA
Septation ring formation regulator EzrA; KEGG: edi:EDI_341030 2.7e-13 intracellular protein transport protein USO1; Psort location: Cytoplasmic, score: 9.89.
 
     0.450
KXB59641.1
Hypothetical protein; Psort location: CytoplasmicMembrane, score: 10.00.
       0.403
KXB59642.1
DHHA1 domain protein; Has phosphodiesterase (PDE) activity against cyclic-di-AMP (c-di-AMP); Belongs to the GdpP/PdeA phosphodiesterase family.
       0.403
Your Current Organism:
Gemella haemolysans
NCBI taxonomy Id: 1379
Other names: ATCC 10379, CCUG 37985, CIP 101126, G. haemolysans, LMG 18984, LMG:18984, NCTC 12968, Neisseria haemolysans
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