STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXB59606.1Hypothetical protein; KEGG: thg:TCELL_0492 0.0075 RNA polymerase Rpb4; K03051 DNA-directed RNA polymerase subunit F; Psort location: CytoplasmicMembrane, score: 9.87. (172 aa)    
Predicted Functional Partners:
KXB60116.1
Hypothetical protein.
  
     0.763
KXB57125.1
Hypothetical protein; Psort location: Cytoplasmic, score: 7.50.
 
     0.739
secD
Export membrane protein SecD; Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA; Belongs to the SecD/SecF family. SecD subfamily.
  
     0.673
murC
UDP-N-acetylmuramate--L-alanine ligase; Cell wall formation; Belongs to the MurCDEF family.
 
     0.667
KXB57583.1
KEGG: oih:OB1684 1.2e-11 hypothetical protein; K07107 acyl-CoA thioester hydrolase.
 
     0.662
KXB59790.1
KEGG: sha:SH1920 2.7e-27 hypothetical protein; K02552 menaquinone-specific isochorismate synthase; Psort location: Cytoplasmic, score: 7.50.
  
     0.656
KXB57757.1
Hypothetical protein; KEGG: ctp:CTRG_04990 4.8e-21 dolichyl-phosphate-mannose--protein mannosyltransferase 1; K00728 dolichyl-phosphate-mannose-protein mannosyltransferase; Psort location: Cytoplasmic, score: 7.50.
  
  
 0.623
SpxA_1
Regulatory protein spx; KEGG: sca:Sca_0597 5.8e-46 spxA; transcriptional regulator Spx; K00537 arsenate reductase; Psort location: Cytoplasmic, score: 7.50; Belongs to the ArsC family.
 
    0.621
EzrA
Septation ring formation regulator EzrA; KEGG: edi:EDI_341030 2.7e-13 intracellular protein transport protein USO1; Psort location: Cytoplasmic, score: 9.89.
  
     0.608
KXB63623.1
Sortase family protein; KEGG: mcl:MCCL_0812 2.1e-34 hypothetical protein; K07284 sortase A.
  
     0.606
Your Current Organism:
Gemella haemolysans
NCBI taxonomy Id: 1379
Other names: ATCC 10379, CCUG 37985, CIP 101126, G. haemolysans, LMG 18984, LMG:18984, NCTC 12968, Neisseria haemolysans
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.