STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXB59566.1Hypothetical protein; KEGG: hap:HAPS_2241 0.0085 lonH; putative S16 family lon protease, ATP-dependent protease; K04770 Lon-like ATP-dependent protease; Psort location: Cytoplasmic, score: 7.50. (94 aa)    
Predicted Functional Partners:
SsbB
KEGG: shn:Shewana3_3590 8.5e-08 single-strand binding protein K03111; Psort location: Cytoplasmic, score: 9.67.
       0.520
guaA
GMP synthase domain protein; Catalyzes the synthesis of GMP from XMP.
     
 0.512
MngR_2
KEGG: efe:EFER_3657 3.2e-08 GntR-family transcriptional regulator K03710; Psort location: Cytoplasmic, score: 7.50.
  
    0.475
TreR_1
Trehalose operon repressor; KEGG: bcz:BCZK3111 3.4e-18 GntR family transcriptional regulator K00837; Psort location: Cytoplasmic, score: 7.50.
  
    0.475
TreR_3
Putative trehalose operon repressor; KEGG: btk:BT9727_3183 1.2e-20 GntR family transcriptional regulator K00837; Psort location: Cytoplasmic, score: 7.50.
  
    0.475
nadD
Nicotinate-nucleotide adenylyltransferase; Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD).
   
    0.463
KXB59563.1
KEGG: pfe:PSF113_1990 5.9e-05 MarR family transcriptional regulator; Psort location: Cytoplasmic, score: 7.50.
  
  
 0.420
KXB59565.1
Hypothetical protein; KEGG: bce:BC2022 4.9e-33 oxidoreductase; Psort location: Cytoplasmic, score: 7.50.
       0.410
sigA
RNA polymerase sigma factor RpoD; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth.
   
 
 0.400
Your Current Organism:
Gemella haemolysans
NCBI taxonomy Id: 1379
Other names: ATCC 10379, CCUG 37985, CIP 101126, G. haemolysans, LMG 18984, LMG:18984, NCTC 12968, Neisseria haemolysans
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