STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
YqeHRibosome biogenesis GTPase YqeH; KEGG: bcy:Bcer98_3061 2.9e-106 GTP-binding protein YqeH K06948; Psort location: Cytoplasmic, score: 7.50. (376 aa)    
Predicted Functional Partners:
rsfS
Iojap-like protein; Functions as a ribosomal silencing factor. Interacts with ribosomal protein L14 (rplN), blocking formation of intersubunit bridge B8. Prevents association of the 30S and 50S ribosomal subunits and the formation of functional ribosomes, thus repressing translation.
  
 
 0.917
KXB59585.1
KEGG: efi:OG1RF_12177 1.7e-32 yqeG; HAD superfamily phosphatase K07015; Psort location: Cytoplasmic, score: 7.50.
 
  
 0.879
nadD
Nicotinate-nucleotide adenylyltransferase; Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD).
  
    0.869
YqfB
Hydrolase, HD family; KEGG: bqy:MUS_2859 4.1e-29 nadD; putative nicotinate-nucleotide adenylyltransferase; Psort location: Cytoplasmic, score: 7.50.
  
  
 0.856
KXB59587.1
RNA-binding protein, YhbY family; KEGG: sul:SYO3AOP1_0241 0.0058 UvrD/REP helicase; K03657 DNA helicase II / ATP-dependent DNA helicase PcrA; Psort location: Cytoplasmic, score: 7.50.
  
  
 0.850
rpmD
Ribosomal protein L30; KEGG: apb:SAR116_2409 3.4e-09 50S ribosomal protein L30 K02907; Psort location: Cytoplasmic, score: 9.67.
   
 
 0.780
RsmB
Ribosomal RNA small subunit methyltransferase B; Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA.
  
 
 0.765
rplX
Ribosomal protein L24; One of the proteins that surrounds the polypeptide exit tunnel on the outside of the subunit.
  
 
 0.752
Psd
Phosphatidylserine decarboxylase; Catalyzes the formation of phosphatidylethanolamine (PtdEtn) from phosphatidylserine (PtdSer).
  
    0.751
KXB59591.1
Methyltransferase domain protein; KEGG: bce:BC4326 2.5e-29 methyltransferase K00599; Psort location: Cytoplasmic, score: 7.50.
  
  
 0.749
Your Current Organism:
Gemella haemolysans
NCBI taxonomy Id: 1379
Other names: ATCC 10379, CCUG 37985, CIP 101126, G. haemolysans, LMG 18984, LMG:18984, NCTC 12968, Neisseria haemolysans
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