STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXB59445.1KEGG: lml:lmo4a_2172 2.0e-36 nitroreductase family protein; Psort location: Cytoplasmic, score: 7.50; Belongs to the flavin oxidoreductase frp family. (253 aa)    
Predicted Functional Partners:
ribA
3,4-dihydroxy-2-butanone-4-phosphate synthase; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate; Belongs to the GTP cyclohydrolase II family. In the N-terminal section; belongs to the DHBP synthase family.
  
 
 0.586
KXB59802.1
ABC-2 type transporter; KEGG: apb:SAR116_0895 4.1e-05 ABC protein; Psort location: CytoplasmicMembrane, score: 10.00.
  
  
 0.571
MetH
KEGG: smn:SMA_1241 8.6e-226 5,10-methylenetetrahydrofolate reductase/Homolog of homocysteine-binding domain; K00547 homocysteine S-methyltransferase; Psort location: Cytoplasmic, score: 7.50.
  
  
 0.516
GloA
KEGG: efu:HMPREF0351_12081 6.4e-47 gloA3; lactoylglutathione lyase K01759; Psort location: Cytoplasmic, score: 7.50.
  
  
 0.509
KXB59446.1
Hypothetical protein; KEGG: bpu:BPUM_3702 7.4e-09 ybbA; esterase.
  
    0.494
KXB57464.1
Glyoxalase family protein; KEGG: ssa:SSA_1625 1.3e-46 lactoylglutathione lyase K08234; Psort location: Cytoplasmic, score: 7.50.
  
  
 0.477
tadA
Cytidine and deoxycytidylate deaminase zinc-binding region; Catalyzes the deamination of adenosine to inosine at the wobble position 34 of tRNA(Arg2); Belongs to the cytidine and deoxycytidylate deaminase family.
  
    0.464
KXB59443.1
Toxin-antitoxin system, toxin component, HicA family.
       0.452
KXB59444.1
Hypothetical protein; Psort location: Extracellular, score: 8.91.
       0.452
Your Current Organism:
Gemella haemolysans
NCBI taxonomy Id: 1379
Other names: ATCC 10379, CCUG 37985, CIP 101126, G. haemolysans, LMG 18984, LMG:18984, NCTC 12968, Neisseria haemolysans
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.