STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXB59339.1Hypothetical protein; KEGG: lki:LKI_01225 9.2e-16 LexA repressor K09976; Psort location: CytoplasmicMembrane, score: 9.55. (81 aa)    
Predicted Functional Partners:
YnzC
Hypothetical protein.
 
    0.837
frr
Ribosome recycling factor; Responsible for the release of ribosomes from messenger RNA at the termination of protein biosynthesis. May increase the efficiency of translation by recycling ribosomes from one round of translation to another; Belongs to the RRF family.
       0.774
EzrA
Septation ring formation regulator EzrA; KEGG: edi:EDI_341030 2.7e-13 intracellular protein transport protein USO1; Psort location: Cytoplasmic, score: 9.89.
  
     0.770
recU
Recombination protein U; Endonuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves mobile four-strand junctions by introducing symmetrical nicks in paired strands. Promotes annealing of linear ssDNA with homologous dsDNA. Required for DNA repair, homologous recombination and chromosome segregation; Belongs to the RecU family.
  
     0.765
DnaB
Replication initiation and membrane attachment protein, DnaB/DnaD family; KEGG: sax:USA300HOU_1672 7.4e-30 dnaB2; replicative DNA helicase K03346; Psort location: Cytoplasmic, score: 7.50.
 
     0.750
KXB63618.1
Hypothetical protein; Psort location: Cytoplasmic, score: 7.50; Belongs to the UPF0356 family.
  
     0.738
KXB58266.1
Putative ComG operon protein 3; Required for transformation and DNA binding.
  
     0.737
GpsB
Putative cell cycle protein GpsB; Divisome component that associates with the complex late in its assembly, after the Z-ring is formed, and is dependent on DivIC and PBP2B for its recruitment to the divisome. Together with EzrA, is a key component of the system that regulates PBP1 localization during cell cycle progression. Its main role could be the removal of PBP1 from the cell pole after pole maturation is completed. Also contributes to the recruitment of PBP1 to the division complex. Not essential for septum formation.
 
     0.734
KXB62849.1
KEGG: lsp:Bsph_4142 2.3e-42 hypothetical protein; K00571 site-specific DNA-methyltransferase (adenine-specific).
  
     0.724
KXB62890.1
Hypothetical protein; KEGG: mpu:MYPU_1770 7.8e-21 cysS; cysteinyl-tRNA synthetase (cysteine--tRNA ligase) K01883; Psort location: Cytoplasmic, score: 9.67; Belongs to the UPF0374 family.
 
    0.719
Your Current Organism:
Gemella haemolysans
NCBI taxonomy Id: 1379
Other names: ATCC 10379, CCUG 37985, CIP 101126, G. haemolysans, LMG 18984, LMG:18984, NCTC 12968, Neisseria haemolysans
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