STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
potAPutrescine/spermidine ABC transporter ATPase protein; Part of the ABC transporter complex PotABCD involved in spermidine/putrescine import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Spermidine/putrescine importer (TC 3.A.1.11.1) family. (362 aa)    
Predicted Functional Partners:
PotB
Putative spermidine/putrescine ABC transporter membrane protein; KEGG: ebe:B21_01131 4.0e-38 potB; potB, subunit of putrescine/spermidine ABC transporter K11071; Psort location: CytoplasmicMembrane, score: 10.00.
 0.999
PotD
KEGG: ebe:B21_01129 8.7e-59 potD; potD, subunit of putrescine/spermidine ABC transporter K11069.
 
 0.996
YdcV
ABC transporter, permease protein; KEGG: gwc:GWCH70_0325 4.2e-75 ornithine carbamoyltransferase K11070; Psort location: CytoplasmicMembrane, score: 10.00.
 
 
 0.995
KXB64331.1
ABC transporter, ATP-binding protein; KEGG: ssr:SALIVB_0212 5.3e-68 msbA; lipid A export ATP-binding/permease msbA; Psort location: CytoplasmicMembrane, score: 10.00.
 
   
0.894
LagD_1
ABC transporter, ATP-binding protein; KEGG: llk:LLKF_1641 1.1e-58 ypgD; multidrug resistance ABC transporter ATP-binding/permease K06148; Psort location: CytoplasmicMembrane, score: 10.00.
 
   
0.841
PuuR
KEGG: apb:SAR116_1706 1.9e-08 DNA-binding protein; Psort location: Cytoplasmic, score: 7.50.
  
  
 0.801
MsbA_2
ABC transporter, ATP-binding protein; KEGG: tcx:Tcr_1519 7.8e-42 Lipid A export ATP-binding/permease MsbA; K11085 ATP-binding cassette, subfamily B, bacterial MsbA; Psort location: CytoplasmicMembrane, score: 10.00.
 
   
0.617
OpuCC
ABC transporter, substrate-binding protein, QAT family; KEGG: stj:SALIVA_1161 3.5e-165 glycine betaine/L-proline ABC transporter,permease/glycine betaine/L-proline-binding protein; Psort location: CytoplasmicMembrane, score: 10.00.
 
 
 0.567
EcsA_2
KEGG: llk:LLKF_2182 9.4e-78 ecsA; ABCtransporter, ATP-binding protein EcsA K01990; Psort location: CytoplasmicMembrane, score: 9.96.
 
   
0.554
ArtQ
Putative arginine ABC transporter, permease protein ArtQ; KEGG: rcm:A1E_00665 3.7e-44 sdhA; succinate dehydrogenase flavoprotein subunit K02029; Psort location: CytoplasmicMembrane, score: 9.99.
 
 
 0.547
Your Current Organism:
Gemella haemolysans
NCBI taxonomy Id: 1379
Other names: ATCC 10379, CCUG 37985, CIP 101126, G. haemolysans, LMG 18984, LMG:18984, NCTC 12968, Neisseria haemolysans
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